Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4174 ATGAACAAAAAACAACCCTTCTTCTTTCTCTTCTCTTCTCCCTTAATTTATTCATACATCACCCTTTTTTATCTTCTTCTTACCACAACCACTGTATGCTCTATAGAACAAAAATTTGTAGATTGTGAAGCCAAAACATGTGGCAACCAAAGTATAAGCTACCCTTTCTATATAATAGGATTACAACATTCCTATTGTGGCTACCCTGGTTTTGGTATCACTTGTAACAATACTATTGGTTTTCCAATCCTTAATCTTTCTAATACTGAATACATAATCGAGGAGATTTTCTATCAAAACCATTCATTTAGAGTTTCCAATGTTGTTTTTTCAAGATCAAACACCAACAAAGGTTGTCTTTCACCAACCCAAAACCTCACTTTTCCCCATAACATGTTCTATCTTGCACCTAACCAAAGTGAAGTGAAATTGTTCTTCGGATGCGATTCAACAAAGCTACCCAGAGAGCTGCAAAGGAACACAATTGGTTGCTCTGAAGAAAACAAAACGAGTTCGGTTGTGGCATTGTATGATGATGATAAAAATGCAAGCCTGGTGTCAAAGAATTGCAGGGATGAAGTGATTAATACGAGGGTGGAAAATGTTGTGAAAGGAGGGATTGAAGAGTCACTGAGAAATGGGTTTAGGTTGAATTGGATAGCTAGTGATTGCAATGAGTGTAACAGCACTGGAGGAAGGTGTGGCTTTGATAAAGATGTATACAATTTCAAGTGTTACTGCACTGATAGAGTTCATTCTGCAAAATGTGATACAGTTAAAGGGCTGACTCGGAATGCCAAATTGGGTATAGGTTTGGGGATTGGTATTGGAATCCCAGGCATCTTGTTGATTGGGGTGGTGTTTCTCCTTCGACTCTGCAAACGGAAACATGCTATTTCGGTTGGACACTTCCAATCTAGTAACTCTTATTCTGATTCCTCCATAAATCCACGCAGAGAGACTGGTAGTAAATATTTCGGAGTTCCATTATTCTCCTACGATGAGCTTAGAAAAGCAACAAACAATTTTGACCATAATAAAGAACTTGGAGATGGAGGTTTTGGTACCGTCTACTTTGGGAAACTTCCAGATGGACGTGAAGTTGCTGTCAAGCGTTTATATGAACACAACTATAGGAGAGTAGAGCAGTTCATGAATGAAGTCAATATTCTGACAACTTTGCGGCACAAAAATCTTGTGTCCCTCTATGGATGCACTTCACGGCACAGTCGTGAACTACTTCTTGTGTATGAATATATCTCAAATGGTACCATTGCATGTCATCTCCATGGTGAATTGGCCAAGCCCGACTTACTACCATGGTCTATACGAATTAAAATTGCCATAGAGACTGCTAATGCCTTGGCTTATCTCCATGCTTCTGGGATCATTCACCGTGACGTGAAAACCAGCAACATACTTCTTGACGGCAATTTTGGTGTTAAAGTTGCAGATTTTGGCCTTTCAAGACTATTCCCCGAGGATGCCACTCATGTCTCCACAGCTCCACAAGGAACACCAGGTTACCTTGACCCCGAGTATCACCAATTTTATCAGCTTACTAGCAAGAGTGATGTATATAGTTTTGGAGTTGTGCTCATTGAACTAATATCATCAAAGCCTGCTGTTGATATAAACAGAAGTAGGGAAGAGATTAACTTGTCAACTCTAGCCACAAAGAAGATTCAAGAAAGTGCAATTGATGAGCTCGTAGATCCTTCTCTTGGTTTTCATTCAGACAGTGAGGTTAATAGGATGATAGTTTCAGTGGCAGAATTGGCTTTTCAGTGTTTGCAAAAGGACAAAGAGTTAAGACCTTCTATGGAAGAAGTATTAGATGAACTTAGGAGAATAGAAAGTGGGAAAGATGGGGTTGAGGTTGTAGAGGAGGCAGATGTTGATGGTGTTGGATCATCACACAGTATTATACAGCCACCACCAGTCTCACCTGAATGGGATGAAGTTGGATTATTGAAGAATGTGAAAATTATGAAGCATCCGTCTTCACCAAACACCGTCACCGATAAATGGGAAAGTATTAATACTACGCCTAATGCCAGTGCTTAA 2067 0.3972 MNKKQPFFFLFSSPLIYSYITLFYLLLTTTTVCSIEQKFVDCEAKTCGNQSISYPFYIIGLQHSYCGYPGFGITCNNTIGFPILNLSNTEYIIEEIFYQNHSFRVSNVVFSRSNTNKGCLSPTQNLTFPHNMFYLAPNQSEVKLFFGCDSTKLPRELQRNTIGCSEENKTSSVVALYDDDKNASLVSKNCRDEVINTRVENVVKGGIEESLRNGFRLNWIASDCNECNSTGGRCGFDKDVYNFKCYCTDRVHSAKCDTVKGLTRNAKLGIGLGIGIGIPGILLIGVVFLLRLCKRKHAISVGHFQSSNSYSDSSINPRRETGSKYFGVPLFSYDELRKATNNFDHNKELGDGGFGTVYFGKLPDGREVAVKRLYEHNYRRVEQFMNEVNILTTLRHKNLVSLYGCTSRHSRELLLVYEYISNGTIACHLHGELAKPDLLPWSIRIKIAIETANALAYLHASGIIHRDVKTSNILLDGNFGVKVADFGLSRLFPEDATHVSTAPQGTPGYLDPEYHQFYQLTSKSDVYSFGVVLIELISSKPAVDINRSREEINLSTLATKKIQESAIDELVDPSLGFHSDSEVNRMIVSVAELAFQCLQKDKELRPSMEEVLDELRRIESGKDGVEVVEEADVDGVGSSHSIIQPPPVSPEWDEVGLLKNVKIMKHPSSPNTVTDKWESINTTPNASA* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4174 688 MobiDBLite consensus disorder prediction 667 688 - -
Mtr1g4174 688 Pfam Wall-associated receptor kinase C-terminal 169 249 IPR032872 -
Mtr1g4174 688 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 32 687 IPR044652 -
Mtr1g4174 688 Gene3D Phosphorylase Kinase; domain 1 315 419 - -
Mtr1g4174 688 Gene3D Transferase(Phosphotransferase) domain 1 420 629 - -
Mtr1g4174 688 SMART serkin_6 343 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4174 688 ProSiteProfiles Protein kinase domain profile. 343 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4174 688 SUPERFAMILY Protein kinase-like (PK-like) 321 615 IPR011009 -
Mtr1g4174 688 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 32 687 - -
Mtr1g4174 688 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Mtr1g4174 688 Pfam Protein kinase domain 344 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4174 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Mtr1g4174 688 Pfam Wall-associated receptor kinase galacturonan-binding 42 106 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4174 Mtr-Chr1 53345045 53358421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4174 38 688 Receptor kinase-like Gene Family AT1G25390 46.107 7.69e-169 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mtr1g4174 Pkinase 2.5e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4174 1 53345045 53358421 Mtr1g4174 1 53345045 53358421 ECH