Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4166 ATGTTCCCTTTTTCTTTTCATTTCCTCTTTTTTCTTCTCTTTTGCAACACTCTTTCACCTCTAGCTAATTCTCTAAACCCTGAAGGCTATGTTCTTCTAACACTAAAACAATCCCTCAAAGATCCACAAGGTTCTATGAATAACTGGAACTCTTCTGATCAAAACCCTTGTTCATGGAATGGAATCACCTGCAAAGACAAAACTGTTGTTTCCATTAGTATCCCAAAAAGAAAACTTAATGGTTCTCTTCCTTCTTCACTAGGTTCTCTTTCACAGCTTCGTCATGTCAATTTCAGGAACAATGAACTCTTTGGACCTTTGCCTCATGACCTTTTTCAAGCTCAAGGACTTCAAAGTTTGGTGCTTTATGGTAATTCCTTTTCTGGGTCTGTTCCTAATGAGATTCACAATCTTAGGTACCTTCAAACTCTAGATTTGTCTCAAAATTTCTTTAATGGGTCGTTTCCTGCTTCAATTGTTCAATGTAAGAGACTTAAAACTCTTGTTATCAGTAGAAATAATTTTACTGCTTCTTTGCCTGATGGATTTGGTACTGGTTTGTCTTCTCTTGAAAAACTTGACCTTTCTTTCAATCAATTTAATGGTTCAATTCCTACTGACTTTGGAAATTTGTCAAGTTTGCAAGGAACTGTTGATTTGTCTCATAATCATTTTAGTGGTTTAATCCCAGTTAGCCTTGGAAATTTGCCTGAGAAGGTTTATATTGATCTTACTTACAATAATTTGAATGGTCCAATACCACAAAATGGTGCTTTGATGAATAGAGGACCAACTGCTTTTATTGGAAATCCTGGTTTGTGTGGTCCGCCTTTGAAGAATCCATGTGGTTCTGATGTTCCAGCTACTAGTTCACCTTCCTCAAATCCAAATCTTCCTGTCAATTATCCACCAAATGATGCTGGTTTTGGTTCTGAGAAAAGCAAAGGGCTAAGTAAAGGTGCTGTGGTTGGCATTGTTGTTGGTGATTTAATTGGAATTTGTCTTTTAGGTTTGTTGTTCTCTTTCTTTTACTCGAGGGTTTGCGGTTTTACTCAGGATCAGGATGAAAATGATGTTACCAAGAGAAGGAAAAGAAGGAAAGAGTGTTTTTGTTTCAGAAAGGATGAATCTGAGGCACTATCTGATAATGTCGAGCAATATGATCTTGTTCCATTAGATTCCCAAGTGGCTTTTGATTTGGATGAACTTCTTAAGGCTTCAGCTTTTGTTCTTGGTAAGAGTGGAATAGGGATTATGTACAAAGTTGTTCTTGAAGAGGGGCTTGCTTTGGCTGTGAGAAGATTGGGGGAAGGAGGTTCTCAAAGGTTTAAAGAATTTCAAACAGAAGTAGAAGCTATAGGGAAGTTAAGGCATCCAAATATTGCTACTCTTCGAGCTTATTACTGGTCTGTTGATGAGAAGCTTCTCATATATGATTATATACCAAATGGAAGCCTTGCTTCAGCAATTCACGGGAAGGCAGGACTTGTCACATTTACGCCGCTAACTTGGTCGGACCGACTGAAAATCATGAAAGGAACTGCAAAAGGACTGGTCTATCTGCATGAGTTCAGCCCCAAAAAATATGTCCATGGAGATCTAAAGCCAAGTAACATACTTCTTGGACATGACATGACACCCTACATTTCCGATTTTGGACTAGGGCGCCTCGCAAACATCGCTGGAGGTTCACCGACCCTGCAATCGAACCGAGTGGCTGCAGAGAAACTACATGAAAGACAGAAAAGCTTGTCCAATGAAGTCGCAACAAATATTATTGGAAGTGGTTATCAAGCTCCGGAAGCACTTAAAGTGGTGAAGCCATCACAGAAGTGGGATGTTTATTCATATGGTGTAATTTTGTTAGAAATGATGACAGGAAGATTACCTATTGTACAAGTAGGTAACTCAGAAATGGACCTTGTTCAATGGATTCAGTTCTGCATTGAAGAGAAGAAGCCTCTCTCAGATGTATTAGATCCATACTTGGCTGAAGATGCAGATAAAGAGGAAGAGATGATTGGAGTTTTGAAGATTGCTATGGCTTGTGTTAACAGCAGCACTGAAAAGAGACCTACAATGAGGCATGTACTTGATGCTTTGGATAGATTGTCTGTTTCATCTGATTGA 2130 0.3887 MFPFSFHFLFFLLFCNTLSPLANSLNPEGYVLLTLKQSLKDPQGSMNNWNSSDQNPCSWNGITCKDKTVVSISIPKRKLNGSLPSSLGSLSQLRHVNFRNNELFGPLPHDLFQAQGLQSLVLYGNSFSGSVPNEIHNLRYLQTLDLSQNFFNGSFPASIVQCKRLKTLVISRNNFTASLPDGFGTGLSSLEKLDLSFNQFNGSIPTDFGNLSSLQGTVDLSHNHFSGLIPVSLGNLPEKVYIDLTYNNLNGPIPQNGALMNRGPTAFIGNPGLCGPPLKNPCGSDVPATSSPSSNPNLPVNYPPNDAGFGSEKSKGLSKGAVVGIVVGDLIGICLLGLLFSFFYSRVCGFTQDQDENDVTKRRKRRKECFCFRKDESEALSDNVEQYDLVPLDSQVAFDLDELLKASAFVLGKSGIGIMYKVVLEEGLALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIATLRAYYWSVDEKLLIYDYIPNGSLASAIHGKAGLVTFTPLTWSDRLKIMKGTAKGLVYLHEFSPKKYVHGDLKPSNILLGHDMTPYISDFGLGRLANIAGGSPTLQSNRVAAEKLHERQKSLSNEVATNIIGSGYQAPEALKVVKPSQKWDVYSYGVILLEMMTGRLPIVQVGNSEMDLVQWIQFCIEEKKPLSDVLDPYLAEDADKEEEMIGVLKIAMACVNSSTEKRPTMRHVLDALDRLSVSSD* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4166 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Mtr1g4166 709 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 8 708 - -
Mtr1g4166 709 Pfam Protein kinase domain 411 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4166 709 Gene3D Transferase(Phosphotransferase) domain 1 481 709 - -
Mtr1g4166 709 Pfam Leucine rich repeat 164 215 IPR001611 GO:0005515
Mtr1g4166 709 CDD STKc_IRAK 411 704 - -
Mtr1g4166 709 SMART serkin_6 410 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4166 709 ProSiteProfiles Protein kinase domain profile. 405 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4166 709 Gene3D Phosphorylase Kinase; domain 1 374 480 - -
Mtr1g4166 709 SUPERFAMILY Protein kinase-like (PK-like) 410 701 IPR011009 -
Mtr1g4166 709 Gene3D Ribonuclease Inhibitor 79 285 IPR032675 -
Mtr1g4166 709 Gene3D Ribonuclease Inhibitor 19 78 IPR032675 -
Mtr1g4166 709 SUPERFAMILY L domain-like 27 279 - -
Mtr1g4166 709 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 708 - -
Mtr1g4166 709 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4166 Mtr-Chr1 53246321 53249233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4166 8 709 Receptor kinase-like Gene Family AT2G01210 67.133 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr1g4166 Pkinase 1.2e-31 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4166 1 53246321 53249233 Mtr1g4166 1 53246321 53249233 ECH