Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4161 ATGGAGGCGCAACCCCAACCTCCAACGCCGTCAACCGGACCACCGTTATCCTCCGTGGCTCCACCACCACCACACCTTAACTACCCCGATTCCGTTGATTCCTCCCCTCGTTCCCGCAACAACGACTCATGGGACGAACCTTTCCCTCCAGCCACATCCAAACTCCGTCTGATGTGCAGTTACGGCGGCCACATCGTCCCTCGTCCAACCGACAAAGCTCTCTGTTACGTCGGCGGTGATACTCGCATCGTTGTTGTTGAACGCGCCACCTCACTTGGGGATTTATCCACGCGCCTCTCCAAAACCTTGCTTAATGGAAGACCGTTCACTTTCAAGTATCAGCTTCCAAACGAAGACCTAGATTCGTTAATCTCCGTTTCAACCGATGAAGATTTAGAAAACATGATCGATGAATACGATCGAACGAATTCTACGAATTCGTCTTTGAAACCCTCGCGAATTCGTCTTTTTCTGTTTCCATCGAAACCTGAATCTGCTCAGTCAATTCCACCGCAAATTCTCGATCCTACTGTTAGATCCGGTGAATGGTTCTTTGATACCTTAAACGGTGCCGTTACGTCGCTTAATCGAGGTTTTTCTGATTCTGCCGCTTCTTCTGTGAATCATCTTTTAGGTCTTGAGGATGATGTTGCTGGGAATAATCATATTGAACAAGGTTCCACTGGGGAAGCTCCTGATGGTGTTTCTCAACCTGGATCTTTCGGGAATTGTAAGAACTTGAAGCAGGATGTTCATTCTGTTCCTGATTCGCCTATGATGGAGACTTCTTCGTCCTTTGGCTCGACTTCTTCGTCTCCGTCTTTAGCGAATTTGCCTCCTATCAGGGTGCATGTTGAAGATGGTGTTTCCGGTGGTGTTAGGGCTCAACAGCAGCAACAATTGCAGCAGCAGCAGCAGGATCAAAAGGTTTTGGGGATTGATGAACAGTTTGCTCAAATGGTTGTTGGTGTTGGTGGTATTGGACAGAGGCTACAGGATGAGGGTTTTGCTGTCATGTCTTCACCACCTCATCCTCCTGTGCCAACTACGCTGGCGGCGGTTGGTGTTCCGATTGGTTCTGCTGTGGTTGTTGGTGATTACCAGAATAGGGTATTCTCTGATGATGAGAGATCGGATCATGGTGTGCCTGTGGGATATAGAAAACCACCAACTCCTCAGCCACAGGTTGTTCAAGTTCAACCTCAAGCTCAAAATCAAGCTCAAACTCAATCTCAGGCACAGTCACAAGCACAGACACAGTCACAAGCTCCTCAATTTCAACAAAAGTCAAGTGGTGGTGGCTCGGATTTGCCTTCTCCTGATTCAGTTTCAAGTGATAGTAGTCTTTCCAATGCAATGTCACGCCAAAAACCTGTTGTTTATCAAGAGCAAATTCAGATTCAACCTGGAACTACAAGGGTTAGCAACCCTGTGGATCCAAAACTCAATTTGTCTGATCCACATAGTAGGATCCAGGTGCAGCAACATGTACAGGACCCTGGTTATTTGCTGCAACAGCAATTTGAACTCCAGCAGCAGCAACAGCAATTCGAACTCCAACAGCAGCAACAACAGCCTCAACATCAGCCGCAACAATCACAACCTCAACATCAGCCGCAGCAGCAACAACAGCTTCAACATCATCAGCAGCAGCAGTTTATTCATGGGGGACACTACATTCATCATAACCCTGCAATTCCTACATACTATCCTGTATATCCTTCACAGCAACAGCCCCATCATCAGGTTTACTATGTACCTGCAAGACAGCCCCAACAAGGTTATAATATTTCTGTTCAGCAGGCTAATATGGGTGAATCTGCCACAACAATCCCTTCTAGCAGACCCCAAAATCCTCCAAACCCCACCACATTGGTTCAACAAAATGCAGCTTACAACCCCATTAGAAGTGCTCCTCTACCCAAAACTGAAATGACGGCTGCTGCTTACAGAGCTGCAACTGGAGGCAGTCCTCAATTTGTGCAAGTTCCTACAAGTCAGCATCAACAGCAGTATGTCACTTACTCCCAGATCCACCATCCGTCTCAATCCATGGCTCCTAATTCTGCTGCCCCTGCCAGTTATGCTTATGAATATGCTGATCCTGCTCAAGTATACTACTCTCAGCCTATGGCACCCACAATGCCTTCACAGTATCAGACCATGGCAGCTGCTACTATGATGCAGCCGGAAGTTCCTGGACAACATCCATCAGACGGCATGAAGCAGCAGATAAGAACCTCACAGCCACTATAA 2256 0.4743 MEAQPQPPTPSTGPPLSSVAPPPPHLNYPDSVDSSPRSRNNDSWDEPFPPATSKLRLMCSYGGHIVPRPTDKALCYVGGDTRIVVVERATSLGDLSTRLSKTLLNGRPFTFKYQLPNEDLDSLISVSTDEDLENMIDEYDRTNSTNSSLKPSRIRLFLFPSKPESAQSIPPQILDPTVRSGEWFFDTLNGAVTSLNRGFSDSAASSVNHLLGLEDDVAGNNHIEQGSTGEAPDGVSQPGSFGNCKNLKQDVHSVPDSPMMETSSSFGSTSSSPSLANLPPIRVHVEDGVSGGVRAQQQQQLQQQQQDQKVLGIDEQFAQMVVGVGGIGQRLQDEGFAVMSSPPHPPVPTTLAAVGVPIGSAVVVGDYQNRVFSDDERSDHGVPVGYRKPPTPQPQVVQVQPQAQNQAQTQSQAQSQAQTQSQAPQFQQKSSGGGSDLPSPDSVSSDSSLSNAMSRQKPVVYQEQIQIQPGTTRVSNPVDPKLNLSDPHSRIQVQQHVQDPGYLLQQQFELQQQQQQFELQQQQQQPQHQPQQSQPQHQPQQQQQLQHHQQQQFIHGGHYIHHNPAIPTYYPVYPSQQQPHHQVYYVPARQPQQGYNISVQQANMGESATTIPSSRPQNPPNPTTLVQQNAAYNPIRSAPLPKTEMTAAAYRAATGGSPQFVQVPTSQHQQQYVTYSQIHHPSQSMAPNSAAPASYAYEYADPAQVYYSQPMAPTMPSQYQTMAAATMMQPEVPGQHPSDGMKQQIRTSQPL* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4161 751 MobiDBLite consensus disorder prediction 221 247 - -
Mtr1g4161 751 MobiDBLite consensus disorder prediction 517 552 - -
Mtr1g4161 751 MobiDBLite consensus disorder prediction 729 751 - -
Mtr1g4161 751 MobiDBLite consensus disorder prediction 397 459 - -
Mtr1g4161 751 MobiDBLite consensus disorder prediction 219 278 - -
Mtr1g4161 751 MobiDBLite consensus disorder prediction 466 485 - -
Mtr1g4161 751 MobiDBLite consensus disorder prediction 372 459 - -
Mtr1g4161 751 MobiDBLite consensus disorder prediction 1 48 - -
Mtr1g4161 751 SMART PB1_new 69 159 IPR000270 GO:0005515
Mtr1g4161 751 MobiDBLite consensus disorder prediction 31 47 - -
Mtr1g4161 751 CDD PB1_UP2 58 159 - -
Mtr1g4161 751 Gene3D - 73 159 - -
Mtr1g4161 751 Pfam PB1 domain 74 160 IPR000270 GO:0005515
Mtr1g4161 751 ProSiteProfiles PB1 domain profile. 54 152 IPR000270 GO:0005515
Mtr1g4161 751 PANTHER EXPRESSED PROTEIN 15 742 - -
Mtr1g4161 751 SUPERFAMILY CAD & PB1 domains 71 169 - -
Mtr1g4161 751 MobiDBLite consensus disorder prediction 256 277 - -
Mtr1g4161 751 PANTHER OS05G0427100 PROTEIN-RELATED 15 742 - -
Mtr1g4161 751 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4161 Mtr-Chr1 53200265 53203167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4161 54 194 MAP Kinase Kinase Kinase AT3G46920 38.732 4.37e-24 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4161 1 53200265 53203167 Mtr1g4161 1 53200265 53203167 ECH
Mtr1g4161 1 53200265 53203167 Mtr8g3835 8 49017781 49019766 ECH
Mtr1g4161 1 53200265 53203167 Mtr6g2133 6 38161359 38164926 ECH