Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4159 ATGGCGTTACAGAATTTGTTGTCTTTTCCTAAATTTTGGTCACTCTTTCAGGGAGGGAGACAGATTGACCCGACTGCGCATACAATAAAGTCTCATGGAGCAACACTTGCTAGAAATCACATTCATGATTGGCTTATGTTGGTGCTTCTCATACTAATTGAAGTTATTCTCAATGTAATTCATCCATTTCGCCGCTTTGTTGGAAGGGACATGATGGAAGACCTTAGATATCCAATGAAACAAAACACTGTCCCTGTATGGGCTGTTCCTCTTTATGCAGTTCTGTTGCCAATTTTTGTGTTCCTCTTCTTCTATATGCGTAGGAGAGATGTTTATGATTTGCACCACAGTGTTCTAGGCCTTCTGTTTGCTGTTCTGATAACTGGTGTGTTGACTGATTCAATTAAAGATGCTGTTGGCCGGCCACGGCCAGACTTCTTTTGGCGTTGCTTTCCTGATGGAGTAGAGGTCTATGATAAATTAGGAGGTGTGGTTTGCCATGGCAAGGCTAGTGATATAAAAGAAGGGCATAAGAGTTTCCCCAGCGGTCATACATCATGGTCCTTTGCAGGTCTTGGTTTTCTCTCCTTGTATCTATGCGGGAAGATTAAAGTTTTTGATCGCCAAGGACACATAGCGAAATTATGCATTCTGTTTTTACCTCTCCTTGCTGCATGTCTGGTTGGAATCTCTCGAGTGGACGACTATTGGCACCATTGGCAAGATGTGTTTGCTGGAGGCCTTCTAGGGCTTTTTGTTGCAACCTTTTGCTATTCACAGTTCTTCCCTCCTCCCTATAATGATGATGGATGGGGTCCATATGCATATTTCGTGGCTATGGAGGAAGCAAGAGGCAATGCAAGTTTGAATCGGGAGTCACCCGTTGTAGAAGCCATGGTTGACAATAGGTATGCGAATCAAGTGCCAAGGAGAAATATTGATTCATTCAACCGAAGCCCAACATTGGAAGCCATGGAGTTGGGACACAAGTGA 993 0.4361 MALQNLLSFPKFWSLFQGGRQIDPTAHTIKSHGATLARNHIHDWLMLVLLILIEVILNVIHPFRRFVGRDMMEDLRYPMKQNTVPVWAVPLYAVLLPIFVFLFFYMRRRDVYDLHHSVLGLLFAVLITGVLTDSIKDAVGRPRPDFFWRCFPDGVEVYDKLGGVVCHGKASDIKEGHKSFPSGHTSWSFAGLGFLSLYLCGKIKVFDRQGHIAKLCILFLPLLAACLVGISRVDDYWHHWQDVFAGGLLGLFVATFCYSQFFPPPYNDDGWGPYAYFVAMEEARGNASLNRESPVVEAMVDNRYANQVPRRNIDSFNRSPTLEAMELGHK* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4159 330 PANTHER LIPID PHOSPHATE PHOSPHATASE 17 317 IPR043216 GO:0006644
Mtr1g4159 330 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 39 269 - -
Mtr1g4159 330 SMART acid_phosph_2 118 258 IPR000326 -
Mtr1g4159 330 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 40 265 IPR036938 -
Mtr1g4159 330 CDD PAP2_containing_1_like 75 261 - -
Mtr1g4159 330 Pfam PAP2 superfamily 118 262 IPR000326 -
Mtr1g4159 330 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 17 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4159 Mtr-Chr1 53174787 53179558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4159 17 328 Lipid Metabolism Gene Families AT2G01180 64.968 2.15e-151 426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4159 1 53174787 53179558 Mtr1g4159 1 53174787 53179558 ECH