Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4156 ATGGGTTCTGCGTATGACACAAAACTTATCATCAATGGCCATCTTCCGCAAGATTCTGGTCAATCTCGTCTTAACGAACTTGGTTACAAACAAGAACTCAAACGCGACCTCTCGGTGCTTTCAAATTTTGCGTTTTCATTTTCAATCATATCAGTGTTAACTGGAGTAACAACACTTTACAACACTGGTTTAAACTATGGAGGTCCTGTTTCACTTGTATATGGATGGCTTATAGCTTCAGCTTTCACCATGCTTGTTGCTTTGTCTATGGCTGAAATATGTTCTTCATATCCAACTTCTGGTGGTCTTTACTATTGGAGTGCCAAACTTGCTGGTCCCAATTGGGCACCTTTTGCTTCCTGGATTACTGGCTGGTTCAATATTGTTGGTCAGTGGGCGGTGACAACAAGTGTAGATTTTTCACTTGCACAGCTCATTCAGGTTATCATTCTTCTTAGTACTGGTGGAAAAAATGGTGGTGGTTATGAAGGATCTAAATATGTAACTATTGCTATCCATGGTGGAATTTTGGTCCTGCATGGTATAATAAACAGCCTTCCAATCTCATGGTTGTCGTTCTTAGGGCAATTGGCTGCTTTCTGGAATGTTTTAGGTGTTTTTGTGCTTATGATTATCATTCCATGTGTTGCCCCGGAAAGAGCTAGTGCCAAGTTTGTTTTCACTCATTTCAATAGTGACAACGGGGAAGGAATCAATAGTAAACCTTATATATTTCTGGTGGGACTTCTAATGAGTCAGTACACCCTAACTGGATATGATGCATCAGCTCATATGACAGAGGAAACCAGGGATGCTGATATAAATGGACCAAAAGGAATTATCAGTGCTGTTGGGATATCTGTTCTTGCTGGATGGGGTTACATACTAGGAATTACCTTTGCTGTTACTGACATCCCTTACCTTTTGAATGAAAATAACGAGGCTGGTGGATACGCCATTGCCGAAATATTTTATCTTGCATTTAAGAGAAGATATGGCCATGGAATTGGTGGCATTATTTGCTTGGGAATTATTGCTGTTGCTATATTTTTCTGTGGTATGGGTTCAGTTACAGCCAATTCAAGGATGGCTTATGCTTTCTCAAGAGATGGGGCCATGCCATTGTCGTCATTGTGGCATAAAGTTAACAAGCAGGAGGTCCCCGTAAATGCAGTTTGGCTCTCCGTTTTAATATCTTTTTGCATGGCTCTACCGTCTCTTGGAAGCATAGTGGCATTTGAAGCCATGGTATCCATAGCAGTGATAGGCCTCTACATTGCTTATGCACTGCCTATCTTCTTCAGAGTTACCTTGGCGCGAAAGCGATTTATTGCTGGGCCTTTCAACTTAGGTCGTTACGGATTCGTTGTTGGTTGGATTGCAGTTATTTGGGTGGCCACAATCTCTATACTATTCTCATTGCCTGTTTCCTACCCAATAACCATTGAGACACTTAACTACACACCTGTTGCTGTTGGATGTTTGCTCATTATTGTACTTTCTTATTGGGTACTTAGTGGTAGGCGTTGGTTTAAAGGCCCTATTACCAATATACAAATATGA 1563 0.4107 MGSAYDTKLIINGHLPQDSGQSRLNELGYKQELKRDLSVLSNFAFSFSIISVLTGVTTLYNTGLNYGGPVSLVYGWLIASAFTMLVALSMAEICSSYPTSGGLYYWSAKLAGPNWAPFASWITGWFNIVGQWAVTTSVDFSLAQLIQVIILLSTGGKNGGGYEGSKYVTIAIHGGILVLHGIINSLPISWLSFLGQLAAFWNVLGVFVLMIIIPCVAPERASAKFVFTHFNSDNGEGINSKPYIFLVGLLMSQYTLTGYDASAHMTEETRDADINGPKGIISAVGISVLAGWGYILGITFAVTDIPYLLNENNEAGGYAIAEIFYLAFKRRYGHGIGGIICLGIIAVAIFFCGMGSVTANSRMAYAFSRDGAMPLSSLWHKVNKQEVPVNAVWLSVLISFCMALPSLGSIVAFEAMVSIAVIGLYIAYALPIFFRVTLARKRFIAGPFNLGRYGFVVGWIAVIWVATISILFSLPVSYPITIETLNYTPVAVGCLLIIVLSYWVLSGRRWFKGPITNIQI* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4156 520 PANTHER AMINO-ACID PERMEASE BAT1 HOMOLOG 15 519 - -
Mtr1g4156 520 PIRSF AA_transporter 20 514 - -
Mtr1g4156 520 ProSitePatterns Amino acid permeases signature. 67 98 IPR004840 GO:0006865|GO:0016021|GO:0055085
Mtr1g4156 520 Pfam Amino acid permease 37 494 IPR002293 GO:0016020|GO:0022857|GO:0055085
Mtr1g4156 520 PANTHER AMINO-ACID PERMEASE BAT1 15 519 - -
Mtr1g4156 520 TIGRFAM 2A0304: amino acid permease 24 514 IPR004756 GO:0006865|GO:0016021
Mtr1g4156 520 Gene3D Amino acid/polyamine transporter I 31 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4156 Mtr-Chr1 53150208 53155076 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4156 84 518 Organic Solute Cotransporters AT2G01170 77.471 0.0 659
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4156 1 53150208 53155076 Mtr1g4156 1 53150208 53155076 ECH