Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4150 ATGGCTTCTGCAAAACTCAACTCTCTCTCTTCCCAATGGATCGCTAACAATCCTTTCTCTTCTCGCCGTGGTGGATCTTCCTCCTCTCTCTCCTCCACTCGCAACGTCTCTCTTCCGATCCGCGCTTCTTACTCCGATGAACTTGTTCAAACCGCTAAATCTGTTGCATCTCGCGGTCGTGGAATTCTTGCAATTGATGAATCAAATGCAACCGCTGGGAAGCGTTTGGCATCAATTGGATTGGACAATACTGAGGTTAATCGCCAGGCTTACAGGCAACTTTTACTGACCACACCCGGTCTAGGTGAATACATCTCTGGTGCTATTTTCTTTGAAGAAACCCTTTACCAATCAACAACTGATGGGAAGAAGTTTGTGGATTGTCTCCGCGAGGAGAACATTGTACCTGGCATCAAAGTTGACAAGGGTTTGGTTCCCCTACCAGGGTCAAACAATGAATCATGGTGTCAAGGTTTGGATGGATTGGCTTCTAGATCTGCTGAATACTACAAGCAAGGTGCTCGATTTGCCAAGTGGCGTACAGTTGTCAGCATTCCAAGTGGTCCTTCTGCCTTGGCTGTTAAGGAAGCGGCCTGGGGACTTGCACGATATGCTGCTATCTCTCAGGACAACGGTCTTGTTCCAATAGTTGAGCCTGAAATTCTTCTTGATGGGGACCACCCAATTGAAAGGACACTGGAAGTTGCTGAGAAGGTATGGTCCGAAGTCTTCTTTTATTTGGCCCAGAACAATGTCCTTTTTGAGGGAATTTTGCTCAAGCCTAGCATGGTTACACCTGGTGCTGAGCACAAAGAAAGGGCTTCTCCAGAAACCATTGCCAAATATACACTAACCATGCTTAACAGAAGAGTTCCTCCTGCAGTCCCCGGAATCATGTTTTTGTCAGGTGGACAATCAGAAGTTGAAGCAACTCTAAATCTTAATGCTATGAACCAAAGTCCCAACCCATGGCATGTGTCTTTCTCATACGCACGAGCCCTGCAGAACACCGTGCTTAAGACATGGCAAGGTCGCCCTGAGAATGTTGAAGCAGCTCAAAAGTCTCTTTTGGTCCGTGCCAAAGCTAATTCCTTGGCTCAGCTTGGAAGATACTCTGCCGAGGGTGAAAATGAAGAAGCCAAGAAGGATATGTTCGTCAAGGGCTATACCTACTAG 1176 0.4685 MASAKLNSLSSQWIANNPFSSRRGGSSSSLSSTRNVSLPIRASYSDELVQTAKSVASRGRGILAIDESNATAGKRLASIGLDNTEVNRQAYRQLLLTTPGLGEYISGAIFFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPSGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVLFEGILLKPSMVTPGAEHKERASPETIAKYTLTMLNRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTVLKTWQGRPENVEAAQKSLLVRAKANSLAQLGRYSAEGENEEAKKDMFVKGYTY* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4150 391 Pfam Fructose-bisphosphate aldolase class-I 47 391 IPR000741 GO:0004332|GO:0006096
Mtr1g4150 391 CDD FBP_aldolase_I_a 45 371 - -
Mtr1g4150 391 SUPERFAMILY Aldolase 41 391 - -
Mtr1g4150 391 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 29 391 - -
Mtr1g4150 391 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 29 391 IPR000741 GO:0004332|GO:0006096
Mtr1g4150 391 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 252 262 IPR029768 -
Mtr1g4150 391 Gene3D Aldolase class I 28 390 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4150 Mtr-Chr1 53053649 53056973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4150 42 391 Miscellaneous Gene Families AT3G52930 54.237 4.80e-132 381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4150 1 53053649 53056973 Mtr1g4150 1 53053649 53056973 ECH