Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4147 ATGTCTGGACTACTCAGTGATGGATTTGGAGCAACACATGGAATGATGAGGAATGATCTCATTTGGGTTGTATCAAGAATGCAAGTTCTCATTGATTATTATCCCATTTGGGGAGAGGTACTTGAAATTGACACATGGGTTGGAGCATCGGGAAAGAATGGTATGCGACGAGACTGGCTCATAAGGAGTCAAGCCACGGGCCATATTTTTGCTCGTGCAACAAGCACATGGGTGATGATGAACAGCAAAACAAGACGCCTCTCCAAAATGCCAGAAGAGGTGAGGGATGAACTTACACCTTGGTTTATTGAGAAGCAAGCAATAAAAGAAGATGCTCCCGAAAAAATCATCAAATTAAACAAAGAAGCAAAATACATGAATTCCAATTTGAAGCCCAAGAGAAGTGATTTGGACATGAACCAACATGTTAACAATGTAAAGTATCTAAGGTGGATGCTAGAGACCATTCCAGACCAAATTCTAGAGAGTCACCAATTATCTGGTATCACACTAGAATATAGAAGGGAATGTGGAAGTTCAGATATAGTTCAATCACTATGTGAACCTGAAGAAGATGAAATAGTTCTTAATGGTATGGTTGAACCAGATTACTGCACAAATCTGCTTAATGGATTGTCTTTTGTAAAATCAGATATTATAAATGGTGGTGGAGTTTTGAGCTACCTTGAGCAAAGGCCAATAAGGTATACACATCTTTTACAAGCAAAGGGAGAAAAACAAAATGAAGAAATTGTTAGAGGAAAGACTACATGGAAGAGGAAATTCACTACATGTCCATTTTCTACATAG 810 0.3852 MSGLLSDGFGATHGMMRNDLIWVVSRMQVLIDYYPIWGEVLEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNSKTRRLSKMPEEVRDELTPWFIEKQAIKEDAPEKIIKLNKEAKYMNSNLKPKRSDLDMNQHVNNVKYLRWMLETIPDQILESHQLSGITLEYRRECGSSDIVQSLCEPEEDEIVLNGMVEPDYCTNLLNGLSFVKSDIINGGGVLSYLEQRPIRYTHLLQAKGEKQNEEIVRGKTTWKRKFTTCPFST* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4147 269 Gene3D Hotdog Thioesterase 3 264 - -
Mtr1g4147 269 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 1 262 - -
Mtr1g4147 269 Pfam Acyl-ACP thioesterase 8 259 IPR002864 GO:0006633|GO:0016790
Mtr1g4147 269 CDD 4HBT 15 81 - -
Mtr1g4147 269 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 13 111 IPR029069 -
Mtr1g4147 269 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 125 258 IPR029069 -
Mtr1g4147 269 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 262 IPR045023 GO:0006633|GO:0016297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4147 Mtr-Chr1 52990582 52992640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4147 2 269 Acyl Lipid Metabolism Gene Families AT1G08510 43.866 3.51e-74 230
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4147 1 52990582 52992640 Mtr1g4147 1 52990582 52992640 ECH