Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4145 ATGGAGGGAGAGAATGCGTTGAACTTGCTTCGAAGCAGAATCTGCGATACTGGATTCATCTTCAAAGACTCTTCAGATACCAATTACAGCAAGCTCAAATTCATGATATCAACTTCCGTCGCTGAAGCATGCAACAATTCTATTCTTCTTCTCGGTCCCCGTGGCTCCGGCAAGCTTGCGGTTTTGGATCTAGTTCTTCAAGATTTGTTGATTCAATATCCAGACTCCATTTCAGTGGTTAGGTTGAATGGGCTTTTACATTGTGATGATATCTCTGCATTCAAGGAAATAGCTAGGCAGTTATGCATGGAGCATCAATTGCTATTCTCTAAAGCGGCATCATTTGATGACAACTCCCAATTTATGGTAGCCGTGCTAAAGGAATGTGGATTAGCACATAAAACTGTAATTTTTATTTTGGATGAGTTTGACCTATTTGCTCAGGGTAAACAACGGTTACTTTATAGCTTGCTAGATGCAATGCAATCAGTATCATCACAAGCTGTAGTACTAGGCATTAGCTGCCGCCTGGATGCAGATCAGCTATTGGAGAAAAGAGTACGATCTCGTTTTTCACACAGAAAGCTGTTGTTCTTACCACCTTCAATAGAAGATTCACAAAGATTATTGGTGCATATGCTGACATTACCAATAGATTCAAGCCTTCCATATGATTATGCTGTTGAATTTAATAAAAAGGTTCAAAATATTATAGAAGACAAAAGGTTCAAAGAAATCTTCAATAAATTATTGAACTTTGACTCCTCTGTCAAGCATTTGTTGAAGTTCCTATTCTATGCAGTCTCTCATATGGATTTGCAGACTGGGTTTCTGTCCCGGGAAAACTTTGAAACTGCATTTACAAACATCCAGAGACAGCCCAAACTGGAATGTTTAAAAAATTGCTCCGTATTAGAACTTTATATTTTGGTAAGCATGAAGAGATTGGAAGTTAAAGAGAAAAGTTTGTGTAACTTCAATGCAGTAATGAAAGAGTATAAAAACATACATGATTCTTTCCAGACTTCTGATTACTATGCAAGGAATGTCTGTTTAAGGGCGTTTGAACACCTTCTACACCGTGAACTGTTATGTTTCACAGACAATAGAGGACATAGTTTATCTGTTGAATTTCGTCCTGTAAAGCTCTTAATTTCATCTGCTGAACTGCATCAGGGACTAAAGGCATATCAGTCATGCCCTGCTATCCTTCAAAAGTTAGTAGAACGTGACGGCTGA 1239 0.3826 MEGENALNLLRSRICDTGFIFKDSSDTNYSKLKFMISTSVAEACNNSILLLGPRGSGKLAVLDLVLQDLLIQYPDSISVVRLNGLLHCDDISAFKEIARQLCMEHQLLFSKAASFDDNSQFMVAVLKECGLAHKTVIFILDEFDLFAQGKQRLLYSLLDAMQSVSSQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFLPPSIEDSQRLLVHMLTLPIDSSLPYDYAVEFNKKVQNIIEDKRFKEIFNKLLNFDSSVKHLLKFLFYAVSHMDLQTGFLSRENFETAFTNIQRQPKLECLKNCSVLELYILVSMKRLEVKEKSLCNFNAVMKEYKNIHDSFQTSDYYARNVCLRAFEHLLHRELLCFTDNRGHSLSVEFRPVKLLISSAELHQGLKAYQSCPAILQKLVERDG* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4145 412 PIRSF ORC4 3 411 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Mtr1g4145 412 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 209 392 IPR032705 -
Mtr1g4145 412 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 4 410 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Mtr1g4145 412 Pfam AAA ATPase domain 29 165 IPR041664 -
Mtr1g4145 412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 217 IPR027417 -
Mtr1g4145 412 Gene3D - 25 200 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4145 3 409 Core DNA Replication Machinery Family AT2G01120 64.988 0.0 553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4145 1 52983410 52989012 Mtr1g4145 1 52983410 52989012 ECH