Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4144 ATGGGATTGGGAACCGCCACTGTTCCTATGAATATCCTTCCACAATTCGGGTTGCTTCGAACCCATTTGACCCCTATTCGGGTCAACAACTCTTCCGGGTTCACCTTCCCTCTCTCTCGAAGAAGGAATAGAAGCTTTGGTAAATTCGTTTGCTTCGCCGTTGATGATGAACTCAGACAGAACCAACAACAGCTCAGTACTAGTTCAAATAGAGTTGGCTCTGCCATTGAAGAAAGACCCAGTGAAGAAGCATTGGAAAATTTTAAGGAAGATGGGGAAAGAAGTGCTATCTATGATTTTCTTTATCCTGATAAAGAGCTTCTTCCTGATGATAAAGAAATGAGCATATTTGATCACCTCGAAGAGCTTCGACAAAGAATCTTTATATCAGTTCTGGGAGTTGGAGGAAGCATTTTGGGATGCTTTGCATTTTCAAAAGATTTGGTGAGACTTCTTGAAGCTCCTGTTCAATCAGAGGGTGTCAGATTTCTTCAGCTAGCTCCTGGTGAATTTTTCTTCACCACTTTAAAGGTTTCTGGATATTGTGGCCTTCTCTTGGGAAGTCCTATCATTCTCTATGAAATCATAGCCTTTATAATTCCAGGTCTAACAAAAGCTGAAAGAAGGTTTCTAGGGCCAATTGTTTTAGGCTCATCAGTTCTTTTCTATGCCGGAATAACCTTCTCCTACTTAGTTCTGGTACCCGCAGCATTAAATTTCTTTGTCAATTATGCTGAAGGTGCTGTTGAATCACTGTGGTCCATTGATCAATACTTTGAGTTTGTTCTGGTTCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTACCTATTATACAACTTCTATTGGGACAACTGGGATTGGTTACTGGAGACCGGATGCTATCAGTTTGGAGGTACGTTGTAGTCGGAGCAGTAGTGGCAGCTGCTATAGTTACGCCATCCACAGATCCTCTCACTCAAGTTCTTCTAGCAGCACCATTATTAGGTCTTTACCTAGGTGGTGCGTGGATGGTCAAACTTGCTGGGCGTTAA 1032 0.4225 MGLGTATVPMNILPQFGLLRTHLTPIRVNNSSGFTFPLSRRRNRSFGKFVCFAVDDELRQNQQQLSTSSNRVGSAIEERPSEEALENFKEDGERSAIYDFLYPDKELLPDDKEMSIFDHLEELRQRIFISVLGVGGSILGCFAFSKDLVRLLEAPVQSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKAERRFLGPIVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPIIQLLLGQLGLVTGDRMLSVWRYVVVGAVVAAAIVTPSTDPLTQVLLAAPLLGLYLGGAWMVKLAGR* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4144 343 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 48 343 IPR002033 GO:0016021
Mtr1g4144 343 ProSitePatterns TatC family signature. 258 277 IPR019820 -
Mtr1g4144 343 PANTHER SEC-INDEPENDENT PERIPLASMIC PROTEIN TRANSLOCASE TATC-RELATED 48 343 - -
Mtr1g4144 343 Hamap Sec-independent protein translocase protein TatC [tatC]. 111 343 IPR002033 GO:0016021
Mtr1g4144 343 Pfam Sec-independent protein translocase protein (TatC) 118 326 IPR002033 GO:0016021
Mtr1g4144 343 TIGRFAM tatC: twin arginine-targeting protein translocase TatC 116 331 IPR002033 GO:0016021
Mtr1g4144 343 PRINTS Bacterial Sec-independent translocation TatC protein family signature 115 142 IPR002033 GO:0016021
Mtr1g4144 343 PRINTS Bacterial Sec-independent translocation TatC protein family signature 189 207 IPR002033 GO:0016021
Mtr1g4144 343 PRINTS Bacterial Sec-independent translocation TatC protein family signature 207 233 IPR002033 GO:0016021
Mtr1g4144 343 PRINTS Bacterial Sec-independent translocation TatC protein family signature 258 286 IPR002033 GO:0016021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4144 1 52970208 52973541 Mtr1g4144 1 52970208 52973541 ECH