Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4142 ATGGAAAAGGGTTTGTTAGAGAAAGACAGAGAAGGTGATTCAAGAAGCATAACATGGGGTGTATTTTTTCAAGAGGTGAAAGATGTTTGTTTTCTAGCTCTGCCTATGATCGCCGTCACTCTGTCACAATATTTTCTACAAATTATTTCAATGATAATGGTTGGTCGTTTGGGTAAACTTGCTCTTTCTAGCACAGCTATTGCTATCTCTCTCTGTGGTGTCTCTGGCTTCAGTCTTCTTTTTGGAATGTCATGTGCACTTGAAACTCAATGCGGACAAGCTTATGGTGCAAAGCAATATAAAAAATTTGGTGTTCAAATTTACACTGCTGTCTTTTCTCTTATTATAGCTTGTCTTCCTCTATCTCTATTATGGATCTTCTTGGGAAGGCTATTGATTTTACTCGGTCAAGACCCTCTGATTTCACAAGAAGCTGGAAAATTTTCCATGTGCATGATTCCTGCTCTATTTGCTTATGCAACGCTTCAGGCACTGGTCAGATACTTTCTGATGCAAAGTTTGATACTTCCTCTTGTTATAAGTTCCACTGTTACCCTGTGCTTCCATGTAGCTTTTTGTTGGCTGTTAGTTTTTAAATCTGGATTAGGTTGCTTAGGAGCTGCACTTTCTATTGGTACTTCATACTGGTTGAATGTGATTATACTTGGATTATATATGAAATTCTCCACTGATTGTGAAGAAACTCGGGTTCCGATTTCAATGGAGCCATTCCTTGGAGTAGGAGAGTTCTTTCGATACGCTATTCCATCAGCAGGAATGATTTGCCTTGAGTGGTGGTCATTTGAACTCCTAATCCTTCTTTCTGGTCTTCTACCAAATCCACAGCTTGAAACTTCAGTCTTATCCATATGTTTATCAATCATCTCAACAATCTATACAATACCAGAAGCAACTGGCTCAGCAGCAAGCACTAGAGTTTCAAATGCATTAGGAGGTGGATGTCCACAAGCAGCGCGATTGTCTGTCTTTGCTTCTATGACCGTTGCAGTTTCTGAGGCTATTTTGGTGAGTTCCACCATTTTCGCCTCTCGGAAGGTGTTAGGTTATATATTTAGCAATGAGCAGGATGTGGTGGACTATGTCACACATATGGTTCCTCTAATAAGTATAAATGTTATAGTGGATAGTTTACATGGCACCCTTTCAGGTATTGCTAGAGGATCTGGTTGGCAGAAGTTGGGAGCATATGTGAACCTTGGAGCCTACTATGTTTTTGGAATTCCAATTGCTGTTATATTGGGTTTCTGGTTTGAGTTGAGAGGAAAAGGACTGTGGATTGGGATACTTGTTGGTGCCTTCTGTCAAGCACTTTTGCTAGCCCTTATAACAGGTTTTACAAACTGGGAAAAACAGGCAATCAAGGCACGGGAAAGGATATTTCAAGGAAGACAGGAAGTTTTGCAGTAG 1428 0.402 MEKGLLEKDREGDSRSITWGVFFQEVKDVCFLALPMIAVTLSQYFLQIISMIMVGRLGKLALSSTAIAISLCGVSGFSLLFGMSCALETQCGQAYGAKQYKKFGVQIYTAVFSLIIACLPLSLLWIFLGRLLILLGQDPLISQEAGKFSMCMIPALFAYATLQALVRYFLMQSLILPLVISSTVTLCFHVAFCWLLVFKSGLGCLGAALSIGTSYWLNVIILGLYMKFSTDCEETRVPISMEPFLGVGEFFRYAIPSAGMICLEWWSFELLILLSGLLPNPQLETSVLSICLSIISTIYTIPEATGSAASTRVSNALGGGCPQAARLSVFASMTVAVSEAILVSSTIFASRKVLGYIFSNEQDVVDYVTHMVPLISINVIVDSLHGTLSGIARGSGWQKLGAYVNLGAYYVFGIPIAVILGFWFELRGKGLWIGILVGAFCQALLLALITGFTNWEKQAIKARERIFQGRQEVLQ* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4142 475 PANTHER MULTIDRUG RESISTANCE PROTEIN 6 463 - -
Mtr1g4142 475 CDD MATE_eukaryotic 25 461 IPR045069 GO:0042910|GO:1990961
Mtr1g4142 475 TIGRFAM matE: MATE efflux family protein 35 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr1g4142 475 Pfam MatE 256 419 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr1g4142 475 Pfam MatE 35 195 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr1g4142 475 PANTHER PROTEIN DETOXIFICATION 6 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4142 Mtr-Chr1 52956974 52960977 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4142 1 52956974 52960977 Mtr1g4142 1 52956974 52960977 ECH
Mtr1g4142 1 52956974 52960977 Mtr6g2117 6 37864800 37876350 ECH