Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4141 ATGGAAAAAGGTTTGTTAGAGAAAGACAGAGAGGGTGCTGGTTCAAGAAGCATAACATGGGGTGTATTTTTTCAAGAGGTGAAAGATGTTTGTTTTCTAGCATTGCCTATGATTAGTGTAACTTTGTCACAATATTTTCTACAAATTATTTCAATGATGATGGTTGGTCATTTGGGTAAACTTTCTCTTTCTAGCACAGCTATTGCTATCTCTCTCTGTGTTGTCTCTGGCTTCAGTCTTCTTTTTGGAATGTCATGTGCACTTGAAACGCAATGCGGACAAGCTTATGGTGCAAAGCAATATAGAAAGTTTGGTGTTCAAGTTTACACTGCTATCATTTCTCTTATTATAGCTTGTGTTCCTCTCTCTTTATTGTGGCTCAACTTGGGGAAGTTACTGAGTTTACTTGGCCAAGACCCTTTGATTTCACAAGAAGCTGGAAAATTTGCTATGTGCATGATTCCTGCTCTTTTTGCTTATGCAACTCTTCAGGCACTGGTCAGATACTTTCTTATGCAAAGTTTGGTTCTTCCTCTTGTTATAAGTTCCTCTGTTACCCTTGGATTCCATGTAGCATTTTGTTGGTTATTAGTTTTTAAATCTGGATTAGGTAGCTTAGGAGCTGCATTTTCTATTGGCACTTCATACTGGTTGAATGTGATTATCCTTGGATTATATATGAAATTCTCTGCTGATTGTGAAAAAACGCGGTTTACAATTTCAATGGAGTCATTTGATGGAATAGGTGAGTTCTTTCGCTATGCTATTCCTTCAGCTGGAATGATTTGCTTTGAGTGGTGGTCATTTGAGCTCCTAGTCTTTCTTTCTGGTCTTCTTCCAAATCCACAGCTTGAAACTTCTGTTTTATCCATATGTTTGTCAATCATCTCAACACTCTATACAATACCAGAAGCAACTGGCTCAGCAGCAAGTGCAAGAGTTTCAAATGCATTAGGAGCTGGATGTCCACACGCAGCACGATTGTCTGTCTATGCTGCTATGGCTATCGCAGTTTCTGAGGCTATATTGGTGAGTTCCATCATTTTCGCCTCTCGACGGGTGTTAGGTTATATATTTAGCAATGAGCAGGATGTGGTGGATTATGTCACAGATATGGCTCCTCTAATAAGTCTATCTGTTATAGTAGATAGTTTACATGGTACCCTTTCAGGTATTGCTAGAGGATGTGGTTGGCAGAAATTGGGAGCATATGTGAACCTTGGAGCCTATTATGTTTTTGGAATTCCAATTGCTGTTATATTGGGTTTCTGGTTTGAATTGAGAGGAAAAGGTCTTTGGATTGGGATAATTGTTGGTGCCTCCTGTCAAGCAGTTTTGCTATCCCTTATAACAAGTTTTACAAACTGGGAAAAACAGGCAATTAAGGCACGGGAAAGGATATTTCAAGAAAGTTTTGCAGTACAAAGGATAGATTAG 1437 0.389 MEKGLLEKDREGAGSRSITWGVFFQEVKDVCFLALPMISVTLSQYFLQIISMMMVGHLGKLSLSSTAIAISLCVVSGFSLLFGMSCALETQCGQAYGAKQYRKFGVQVYTAIISLIIACVPLSLLWLNLGKLLSLLGQDPLISQEAGKFAMCMIPALFAYATLQALVRYFLMQSLVLPLVISSSVTLGFHVAFCWLLVFKSGLGSLGAAFSIGTSYWLNVIILGLYMKFSADCEKTRFTISMESFDGIGEFFRYAIPSAGMICFEWWSFELLVFLSGLLPNPQLETSVLSICLSIISTLYTIPEATGSAASARVSNALGAGCPHAARLSVYAAMAIAVSEAILVSSIIFASRRVLGYIFSNEQDVVDYVTDMAPLISLSVIVDSLHGTLSGIARGCGWQKLGAYVNLGAYYVFGIPIAVILGFWFELRGKGLWIGIIVGASCQAVLLSLITSFTNWEKQAIKARERIFQESFAVQRID* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4141 478 PANTHER PROTEIN DETOXIFICATION 5 465 - -
Mtr1g4141 478 CDD MATE_eukaryotic 26 462 IPR045069 GO:0042910|GO:1990961
Mtr1g4141 478 Pfam MatE 257 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr1g4141 478 Pfam MatE 36 196 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr1g4141 478 TIGRFAM matE: MATE efflux family protein 36 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr1g4141 478 PANTHER MULTIDRUG RESISTANCE PROTEIN 5 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4141 Mtr-Chr1 52944609 52948018 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4141 1 52944609 52948018 Mtr1g4141 1 52944609 52948018 ECH
Mtr1g4141 1 52944609 52948018 Mtr6g2113 6 37785433 37795831 ECH