Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4137 ATGGGTGAAGAGAGAAGAGTGATGGAGGAGAGTCTCTTATCAAAACATATTGATTCGAAAGCAGAGAATGGTGATGAAGAAGAGAGGAAGAATAGAGAAATTAGTTGGGATATTTACAGGAAAGAATTGAAGAGGATTTGTTACCTATCAGGTCCTATGGTAGCTGTAACATCTTCACAATATCTTTTACAAGTTGTGTCCATCATGATTGTTGGTCACTTAGGTGAACTCTATCTCTCTAGTGCCGCCTTAGCCATTTCCTTTGCTGGTGTCACCGGTTTCAGCTTCCTGATGGGAATGGCTAGTGGACTAGAAACCACATGTGGACAAGCTTATGGAGCTAAACAATATCAAAGAATAGGAATACAAACATACACATCTATATTTTCTCTCATATTGGTTTGTTTACCACTATCTTTTATTTGGATCAACATTGAGAGCATACTAGTTTTCACAGGACAAGACCCTCTAATTGCACATGAAGCAGGAAGATTCACAATTTGGCTTCTTCCAGCACTTTTTGCATATGCAATATTGCAACCACTAGTTAGATATTTTCAAATACAAAGCTTGCTTATTCCAATGCTTTTAAGCTCTTGTGTCACTCTTTGTATCCATATACCTCTTTGCTGGGCTTTGGTATTCAAGACAGGATTGAATAATATTGGTGGTGCAATTGCAATGAGCATTTCCATTTGGTTAAATGTGATTTTTCTTGGATTATACATGAGATACTCTTCCTCATGCGCAAAAACTAGAGCACCGATTTCTATGGAACTATTTCAAGGAATTTGGGAGTTTTTTCGCTTCGCTATACCTTCTGCTGTAATGGTTTGCCTTGAGTGGTGGTCATATGAGCTAATTGTCTTGCTCTCTGGACTTTTACCTAATCCACAACTTGAAACTTCAGTTCTATCAGTTTGTCTCAATACCATTGCAACTCTCTATACAATACCATTTGGAATTGGTGCTGCAGCAAGCACAAGGGTTTCAAATGAATTAGGAGCTGGTAATCCATTTGAAGCACGTGTTGCCGTGTTAGCTGCTATGTCACTTGGACTCACTGAAGCAAGTATAGTGAGCGCAACCCTCTTTGCATGCCGCCATGTTTATGGCTACATTTTCAGTAGTGATACAGAAGTTGTTAAATACGTCACTGTCTTGGCTCCTCTGGTTTCTATATCCGTTATACTCGACAGCATACAAGGCGTTCTCGCAGGGGTTGCTAGAGGTTGTGGGTGGCAACATATAGGAGTTTATGTCAATCTAGGAGCCTTCTACTTATGTGGGATTCCTGTTGCTGCTGCATTGGCATTTTGGGTTCAAGTGGGAGGAAAAGGACTTTGGATTGGTATACAAGTCGGTGCTTTTGTTCAATGTGTTCTACTTTCTATCATAACATGTTGTATAAATTGGGAGCAACTGGCAAGTAAGGCTAGACAGAGGTTGTTTGATGTTCAATTTTCAGCAGAGAACAGACTTGTATGA 1488 0.3985 MGEERRVMEESLLSKHIDSKAENGDEEERKNREISWDIYRKELKRICYLSGPMVAVTSSQYLLQVVSIMIVGHLGELYLSSAALAISFAGVTGFSFLMGMASGLETTCGQAYGAKQYQRIGIQTYTSIFSLILVCLPLSFIWINIESILVFTGQDPLIAHEAGRFTIWLLPALFAYAILQPLVRYFQIQSLLIPMLLSSCVTLCIHIPLCWALVFKTGLNNIGGAIAMSISIWLNVIFLGLYMRYSSSCAKTRAPISMELFQGIWEFFRFAIPSAVMVCLEWWSYELIVLLSGLLPNPQLETSVLSVCLNTIATLYTIPFGIGAAASTRVSNELGAGNPFEARVAVLAAMSLGLTEASIVSATLFACRHVYGYIFSSDTEVVKYVTVLAPLVSISVILDSIQGVLAGVARGCGWQHIGVYVNLGAFYLCGIPVAAALAFWVQVGGKGLWIGIQVGAFVQCVLLSIITCCINWEQLASKARQRLFDVQFSAENRLV* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4137 495 Pfam MatE 52 211 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr1g4137 495 Pfam MatE 273 434 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr1g4137 495 PANTHER PROTEIN DETOXIFICATION 20 482 - -
Mtr1g4137 495 CDD MATE_eukaryotic 42 478 IPR045069 GO:0042910|GO:1990961
Mtr1g4137 495 PANTHER MULTIDRUG RESISTANCE PROTEIN 20 482 - -
Mtr1g4137 495 MobiDBLite consensus disorder prediction 1 26 - -
Mtr1g4137 495 TIGRFAM matE: MATE efflux family protein 52 449 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4137 Mtr-Chr1 52877352 52882677 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4137 1 52877352 52882677 Mtr1g4137 1 52877352 52882677 ECH