Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4125 ATGGAGAATTCAGGCAGTGGCGAAGAAGAAGCGTTATTGGTGAAAGCTGCAAAATCCACAGACGAACTTTACCTTCTTCGTGACACTTACTTCCCACAAAACCCTGACGACAGAACCTCCAACTTGCAACAACACTCCGATCTCATTCTCACTCTCCTCGATTCCGTTCCTCCAGAAGAAAGAAAATCACCCACTCAGCGAGCAATATTCGAATATCTTCGAGGGAAAGTGTTAGATGTATTTCCTGAATATAAGAAAGAAGCTGAGGATCATCTATCAAAAGCTGTCAAGTTGAATCCATCTCTTGCAGATGCTTGGTTATGTTTAGGAAACTGTATTTGGAAAAAAGGTGATTTATCTGCTGCTAAAAACTGCCTCAATCTTGCATTGAATAAGGGTCCTAACAAGAAGATTCTTTGTCAATTATCAATGCTTAAAAGAAGTATGTCTCAAAGTGCGGATAATCAAGCTGAACTTGTTGATGAAAGCATTCAACATGCCAAGGAAGCAATTGCTTTGGATGTCAAAGATGGGAACTCTTGGTATAATCTTGGAAATGCATATGTGACGAGTTTTTTTGTCACTGGAGGTTGGGATCATACCAGACTTTCACATTCTTTAAAAGCATATCAAAATGCTGAGAAAGATGAAGGGATCAAGTCCAATCCGGACTTTTACTTTAATAGTGCCATTGCTAACAAATATCTAGAGAACTACGAGAGGGCCCTTAGTGGATTTGAGGCTGCTGCTTCAAAGGATCCAGGTCTCAACGCTGCAGATGAGGTTCAGAAAATTGTCAATTTACTTGACAATGTGGACAATCTGTTGAGGGTACATGTAAGAGCTAAGCGAATTGCCGCTTTGGCAGCATCATTGGCTGCTGTAAATTTGAAATTGCCATACAGAACAGTTACCATGGACCTTCTGTCAGAGGGTCTTAATAGAACTCTAGCGGTAGATGGGAAGGTGTTATTCTTTATCAGGAGTGAGGGTGTTGCTCCCCTATACTATTTGCTGTGTGATTCAAACCAAACTTGCTTTGTTCTCTCAATTTATGGTGTACGTCAGGATGTGATTAAAGGAGGAGATCAGCTCACATTGCTTGATCCTTGTTTTCGTGACGTTGATGTGTCCTGGAAGGAAAAGCATTACCAGTTCAAATCTATACGCCTGGATTTCTATGAGCAAGTGCTTGTTAATGGAAAAGCTCTGACTCCTCAGCAAGCTATTCGTACATCGATATACGCACAACATAAACCATGA 1263 0.4086 MENSGSGEEEALLVKAAKSTDELYLLRDTYFPQNPDDRTSNLQQHSDLILTLLDSVPPEERKSPTQRAIFEYLRGKVLDVFPEYKKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSAAKNCLNLALNKGPNKKILCQLSMLKRSMSQSADNQAELVDESIQHAKEAIALDVKDGNSWYNLGNAYVTSFFVTGGWDHTRLSHSLKAYQNAEKDEGIKSNPDFYFNSAIANKYLENYERALSGFEAAASKDPGLNAADEVQKIVNLLDNVDNLLRVHVRAKRIAALAASLAAVNLKLPYRTVTMDLLSEGLNRTLAVDGKVLFFIRSEGVAPLYYLLCDSNQTCFVLSIYGVRQDVIKGGDQLTLLDPCFRDVDVSWKEKHYQFKSIRLDFYEQVLVNGKALTPQQAIRTSIYAQHKP* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4125 420 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 13 344 - -
Mtr1g4125 420 SUPERFAMILY TPR-like 86 247 IPR011990 GO:0005515
Mtr1g4125 420 SMART tpr_5 223 256 IPR019734 GO:0005515
Mtr1g4125 420 SMART tpr_5 103 136 IPR019734 GO:0005515
Mtr1g4125 420 Gene3D - 280 419 IPR038645 -
Mtr1g4125 420 Gene3D Tetratricopeptide repeat domain 6 279 IPR011990 GO:0005515
Mtr1g4125 420 Pfam Tetratricopeptide repeat protein 5 OB fold domain 301 412 IPR032076 -
Mtr1g4125 420 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 13 344 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4125 1 52786367 52793398 Mtr1g4125 1 52786367 52793398 ECH