Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4115 ATGGCTATTCCTTGCCCCCATTTCATCTCCTCCGCAAAAGCCGCCATGGAAGCCGGTCTCCTCATCCCTTCCTCCCCATCTTCCTCCGTCTCCGTCATCCTATCCCAAGACGATTTGAAGAAAATCGCCGCCTACAAAGCCGTCGAATACGTCGAATCCGGTATGGTTCTAGGCCTCGGAACCGGTTCAACCGCCAAACACGCCGTCGCCCGAATCGGGGAGCTTATCCGTCAGGGAAAACTCAAGAACATAATCGGTATACCCACTTCAACCATAACCCATGAACAAGCTGTGTCGCTTGGGATTCCTCTCTCCGATCTAGATTCTCACCCTGTTATTGATCTCGCTATTGATGGTGCTGATGAAGTTGATCCTTATCTGAATTTGGTCAAAGGACGTGGTGGGTCACTTTTGAGAGAGAAAATGGTGGAAGGTGCTTGCAAGAAATTTGTTTGTATTGTTGATGAATCAAAACTCGTTAACTATTTGGGTGGTAGTGGTTTAGCTATGCCTGTTGAAGTTATTCGCTTTTGTTGGAAATTCACTGCTGGTAGGCTTCAGAATCTGTTTGAGGAATCTGGTTGTGTTGCAAAGCTTAGAACTTCCGGTGAAAAAGGAGAACCTTATGTTACTGATAATGGTAATTATATCGTGGATTTGTATTTTAAGAAGAGTATTGGTGATTTGAGGGTTGCAAGTGATGCTATTTTGAATATTGCTGGAGTTGTGGAGCATGGAATGTTTTTGGATATGGCTACTACTGTTATTGTTGCAGGTGAACTTGGATTAACGGTTAAGAGTAAGTAG 807 0.4436 MAIPCPHFISSAKAAMEAGLLIPSSPSSSVSVILSQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVARIGELIRQGKLKNIIGIPTSTITHEQAVSLGIPLSDLDSHPVIDLAIDGADEVDPYLNLVKGRGGSLLREKMVEGACKKFVCIVDESKLVNYLGGSGLAMPVEVIRFCWKFTAGRLQNLFEESGCVAKLRTSGEKGEPYVTDNGNYIVDLYFKKSIGDLRVASDAILNIAGVVEHGMFLDMATTVIVAGELGLTVKSK* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4115 268 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 86 260 IPR004788 GO:0004751|GO:0009052
Mtr1g4115 268 PANTHER ISOMERASE, PUTATIVE-RELATED 1 268 - -
Mtr1g4115 268 SUPERFAMILY NagB/RpiA/CoA transferase-like 36 219 IPR037171 -
Mtr1g4115 268 Hamap Ribose-5-phosphate isomerase A [rpiA]. 36 266 IPR020672 GO:0004751|GO:0009052
Mtr1g4115 268 TIGRFAM rpiA: ribose 5-phosphate isomerase A 39 262 IPR004788 GO:0004751|GO:0009052
Mtr1g4115 268 Gene3D - 162 246 - -
Mtr1g4115 268 CDD RPI_A 39 259 IPR004788 GO:0004751|GO:0009052
Mtr1g4115 268 Gene3D - 39 260 - -
Mtr1g4115 268 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 168 249 - -
Mtr1g4115 268 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 1 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4115 Mtr-Chr1 52696674 52698275 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4115 1 52696674 52698275 Mtr1g4115 1 52696674 52698275 ECH