Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4114 ATGTTAGAAGATTTGCATGAAAATAATGATAAAATTAGGTCTCACAGTGAAGACATTAGAACTGCTCTGCAGCCTTTGTTGAAGTTAATCTGCCTTACACTCATAGGACTCCTTCTTGCAAACCCAAGAATGAAATTAATTCCTAAAGCCACATTTAAACTCCTAAGTAAACTTGTATTTGCATTATTTTTACCCTGCCTAATATTTAGTGAACTTGGTTCAAGCATTACTCTTGAGAATTTTAAGGAATGGTGGTTCATACCAGTTAATGTGCTTCTTTGTACATTTTTTGGATGTTTACTTGGATTCATAGTGGTTACTATATGTCACCCACCTCAAAGGTTTAATAGATTCACAATCATAATGACAGGATTTGGAAACACTGGTAATCTTCTCATTGCTGTAGTTGGATCTGTTTGTCATACTCAAAATACTCCTTTTGGAAAGCAATGCAATGCAAGAGGTGTAGCTTATGTTTCTTTATCTCAATGGATTTCTGTAATTCTTGTTTACACTTTTGTTTATCACATGCTGGAACCTCCTTTTGAGTATTATGAGATTGTTGAAAATGAAGCTGAAATTAGAGAAGAAACAATACTTAATGATATTAGTAGACCACTTCTTGTAGAAGCTGAGTGGCCTGGAATTGAAGATAAAGAAACTCAACATTCTAAGACACCCTTTATTGCTAGAATCTTTAAGAGCTTTTCCGGTATTTCCTCGTCCATTATTCCTGATCCTGATTTTGATTCATTATCAGGATCAGTAATGGCAGACGAGGAAGAAAGTGGTGAAAATAATCATATGTCTATTAGGTGTTTGGCGGAGCCTAGAGTTGTTAGGAGGATAAGAATTGTTGCTGAACAAACTCCAATTCATCACATACTTCAACCACCAACAATTGCATCTTTGTTGGCTATTATCATTGGAACAGTGCCTCAGTTGAAAACATTTTTCTTTGGAAATGATGCACCAATGTCTTTTATGACAGATAGTTTGGAAATTTTGGCAGGTGCAATGGTGCCTTGTGTGATGCTTATACTAGGGGGTATGCTAGCTGAAGGACCAAATGAATCAACACTTGGAATTAAAACTACAATTGGGATAATTGTGGCAAGACTTGTGGTGCTTCCTGTTATAGGAATTGGAGTTGTTGTGTTGGCTGATAAGTTGAATTTTTTGGTTGAAAATGATGCTATGTTTAGGTTTGTGCTTTTGTTGCAATATACAACACCAAGTGCTATTTTGTTGGGAGCAATTGCTAGCTTGAGGGGTTATGCAGTCAGTGAAGCTTCAGCAGTTCTATTCTGGCAGCACGTGTTTGCTCTTTTCTCACTTTCTCTATACATTATAATTTACTTTAGAGTAATTGATTATCTTTAG 1383 0.3586 MLEDLHENNDKIRSHSEDIRTALQPLLKLICLTLIGLLLANPRMKLIPKATFKLLSKLVFALFLPCLIFSELGSSITLENFKEWWFIPVNVLLCTFFGCLLGFIVVTICHPPQRFNRFTIIMTGFGNTGNLLIAVVGSVCHTQNTPFGKQCNARGVAYVSLSQWISVILVYTFVYHMLEPPFEYYEIVENEAEIREETILNDISRPLLVEAEWPGIEDKETQHSKTPFIARIFKSFSGISSSIIPDPDFDSLSGSVMADEEESGENNHMSIRCLAEPRVVRRIRIVAEQTPIHHILQPPTIASLLAIIIGTVPQLKTFFFGNDAPMSFMTDSLEILAGAMVPCVMLILGGMLAEGPNESTLGIKTTIGIIVARLVVLPVIGIGVVVLADKLNFLVENDAMFRFVLLLQYTTPSAILLGAIASLRGYAVSEASAVLFWQHVFALFSLSLYIIIYFRVIDYL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4114 460 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN-RELATED 6 457 - -
Mtr1g4114 460 PANTHER PROTEIN PIN-LIKES 2 6 457 IPR039305 GO:0080162
Mtr1g4114 460 Pfam Membrane transport protein 22 450 IPR004776 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4114 Mtr-Chr1 52677928 52681958 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4114 1 52677928 52681958 Mtr1g4114 1 52677928 52681958 ECH