Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4107 ATGGGAGCTGAAAAAAAATGGCTTTTCACGCTATTCAGTGCAGCAGTTTTATCTCTAATGCTTTTGTTAATGTCTTCTTTTTCAACTTTCAGTTCTCAAAAGCCTTTTCCATCTTTTGTTCAACATGGTTCTCATTACCCTCCTGCTTTTGCATACTTCATCTCTGGTGGACATGGTGATAAAGACCGGATCTTTCGTTTGTTGTTGGCTGTTTATCATCCGAGGAACCGTTATTTGCTTCATCTTGGTATGGATGCTAGGAATGAAGAGAGACAGGGTTTGGCTGATGCTGTTAGTTCTGTTCCCGCGATTCGGGCTTTCGGGAATGTTGATGTGGTTGGCAAGGCTGATTGGATCACTTATTTGGGTTCTTCCAATGTTGCTATTACGCTACGTGCTGCTGCTATTATGCTTAAATTGGATAGTGGATGGAATTGGTTTATCACTTTGAGTGCTCGTGATTATCCTCTCATTACACAGGATGATCTATCCCATGTTTTCTCCTCCGTGAATAGAGACCTCAATTTCATTGATCATACTGGTGACCTTGGATGGAAAGAGAGTGACAGATTCAAGCCTATTGTAGTTGATCCAGGAACATATTTAGCAAGGAGAAGTCAAATTTTTCAAGCTACAGAGAAGAGAGCAACACCTGATGCATTCAAACTCTTCACTGGTTCGCCGTGGGTCACATTGAGCCGACCCTTTCTGGAGTTCTGCATTTTCGGTTGGGATAATTTACCACGAACGCTACTAATGTATTTTACAAATGTTAAGTTATCTCAAGAAGGCTACTTTCACTCAGTCATTTGCAATGCACCCGAATATAAGAACACAACAGTGAATGGTGACTTACGATACATGATATGGGACAATCCTCCAAAGATGGAACCACTCTTCCTTAATACATCTGTTTATGATATGATGGCAGAAAGTGGAGCAGCATTTGCAAGACAGTTCGAGGCTAATAACCCCGTGCTGGATATGATTGACAAAAAAATTCTCCAACGTGGTGGTCGCAACCGAGCTGCACCAGGGGCATGGTGCTCCGGTCGGAGGAGCTGGTGGGTGGATCCGTGCTCACAGTGGGGTGATGTCAATATTCTTAAGCCAGGTCCTCAGGCTAAGAAGCTTGAGGCATCTGTTTCTAGCCTTCTTGATGACTGGACCGCACAGACAAATCAGTGCCAGTGA 1194 0.4347 MGAEKKWLFTLFSAAVLSLMLLLMSSFSTFSSQKPFPSFVQHGSHYPPAFAYFISGGHGDKDRIFRLLLAVYHPRNRYLLHLGMDARNEERQGLADAVSSVPAIRAFGNVDVVGKADWITYLGSSNVAITLRAAAIMLKLDSGWNWFITLSARDYPLITQDDLSHVFSSVNRDLNFIDHTGDLGWKESDRFKPIVVDPGTYLARRSQIFQATEKRATPDAFKLFTGSPWVTLSRPFLEFCIFGWDNLPRTLLMYFTNVKLSQEGYFHSVICNAPEYKNTTVNGDLRYMIWDNPPKMEPLFLNTSVYDMMAESGAAFARQFEANNPVLDMIDKKILQRGGRNRAAPGAWCSGRRSWWVDPCSQWGDVNILKPGPQAKKLEASVSSLLDDWTAQTNQCQ* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4107 397 PANTHER GLYCOSYLTRANSFERASE 2 397 IPR044610 GO:0015020
Mtr1g4107 397 PANTHER OS01G0121800 PROTEIN 2 397 - -
Mtr1g4107 397 Pfam Core-2/I-Branching enzyme 50 297 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4107 Mtr-Chr1 52613577 52618238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4107 1 397 Glycosyltransferase AT1G71070 70.025 0.0 580
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4107 1 52613577 52618238 Mtr1g4107 1 52613577 52618238 ECH