Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4104 ATGACTAAAGAAGAAGACTTTAAGCTCCTTAAAATCCAGACTTGTGTTCTCAAAGTGAACATTCACTGTGATGGTTGTAAGCAGAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGTGTTTACCAAGTTCAAATAGATGCAGAACAGCAGAAGGTAACAGTTTCAGGTAGTGTGGATGCTGCAACTTTGATCAAGAAACTAGTAAGATCTGGAAAATATGCTGAGCTCTGGTCTCAGAAAACCAACAATAATCAGAATCAAAAGCAGAAGAACAACAACAATGTCAAAGATGACAAGAACAGAGGACAAAAACAAGGACTGGTCAAAGGGCTTGAAGTCTTCAAAAATCAGCAGAAATTTCCTGCTTTTAGTTCTGAAGAGGATGATGAATACTACGAATATGACGAGGACGAAGAGGAGGAGGATGAAGAGATGCGGTTCATCAGGGAGAGAACTAATCATCTTCAGATGCTAAAGCAAGCGAATGATGCAAACAATGTGAAGAAAGGTATTATAGCTAAGATGAACAATGCTGGCAATGGAAATAGTGGCAAGAAAGGAAATCCAAATCAGAACATGGTAATGAAGGAAGGTGCTAATGGGATTGATCAGAAAACATTGGCAGCTATGAAGTTGAACAATGCTCATTTGGTTGGTAATGAAAGTCTCAACCTTGGAGAATCCAAAAGGGCTAGCGACATTGGTGCTATGATGAATTTAGCTGGTTTTAATGGGAACAATAACAATGGTGCTGGTAGTGCTACTGTTGTAGGTGGAAATTCCAATGGTTTAGGAGGTTTTCCTGCAGGATCCACTGCATCTATTCCAAATGGTGGTTTTGTTACTGGCCAGTATCCACCATCTATGTTAATGAACATGAATGGTTTCAATAACCATCCATCTTCATTGATGAACATGCAGGCAAGGCATGCTATGCAGCAACAGCCTCAGATGATGTATCACAGGTCACCTTTTGTTCCTCCTAATACTGGCTATCATTACAATTATAATAACTACATTCCTGCAAATTACTCCTATGCAAATGCTTGTTATCCAACGGAGGATAACTCTGCAGCACACATGTTCAGTGATGACAATACTACCAGCAGCTGTTCAATAATGTAA 1125 0.3947 MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDAATLIKKLVRSGKYAELWSQKTNNNQNQKQKNNNNVKDDKNRGQKQGLVKGLEVFKNQQKFPAFSSEEDDEYYEYDEDEEEEDEEMRFIRERTNHLQMLKQANDANNVKKGIIAKMNNAGNGNSGKKGNPNQNMVMKEGANGIDQKTLAAMKLNNAHLVGNESLNLGESKRASDIGAMMNLAGFNGNNNNGAGSATVVGGNSNGLGGFPAGSTASIPNGGFVTGQYPPSMLMNMNGFNNHPSSLMNMQARHAMQQQPQMMYHRSPFVPPNTGYHYNYNNYIPANYSYANACYPTEDNSAAHMFSDDNTTSSCSIM* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4104 374 ProSiteProfiles Heavy-metal-associated domain profile. 20 76 IPR006121 GO:0046872
Mtr1g4104 374 Pfam Heavy-metal-associated domain 17 69 IPR006121 GO:0046872
Mtr1g4104 374 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 374 - -
Mtr1g4104 374 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Mtr1g4104 374 CDD HMA 16 75 IPR006121 GO:0046872
Mtr1g4104 374 Gene3D - 12 84 - -
Mtr1g4104 374 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 37 1 374 - -
Mtr1g4104 374 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4104 Mtr-Chr1 52578571 52581180 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4104 1 52578571 52581180 Mtr1g4104 1 52578571 52581180 ECH