Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3561 ATGCTTGTAATGCCACAGCCACCCAAACCCTTCAACACAATCACCATCACAATCATGATAGCCTTCACCTTCTTCCTCCTCTTCCTCACCGGTTTCCTCCAATTCCCTTCTATTTCACCCTCTCTCCCGGGTCCCATCCACGATTCCTTCACGCTCCCTTCTACAAATACCTCCTCCAAACCCTTCACCGATCTGGTTTCTTCCTTCAGAAAATGGGACTCGCAAGTGGGTTGTGCGAAATTCAGAGAAAAAACAAACGGGGTTTTGTTGAATCAGTCAAAGATTGTTTCTTTGCAAGAATTTGGTGGGGATAAAGTTTGTAAGGGTTTTAAAATGAACCATGTTAGTGTATTGGTTAAAGGGTGGACGTGGATTCCTGATAATTTGGATAATTTGTATTCTTGTCGTTGTGGGTTGAGTTGTTTGTGGACTAAATCCAATGTTCTTGCTGATAAGCCTGATGCTTTGATGTTTGAATCATCTACGCCTCCGATTCAGAGACATGTGGGAGAACCTCTTCGTGCATACATGGATCTTGAAGCTGGCCGAAAAAGATCAGGTCGAGAGGATATATACATTAGCTACCATGCTGAAGATGATGTACAGTCAACCTATGCCGGTGCTCTGTTTCACAACGGCCGAAATTATCATGTCTCTAATACGAAAAGCAGTGATGTTCTTGTTTATTGGTCTTCGTCGCGGTGTCTTCCTCAAAGAAATGAACTTGCCAAGAAACTTCTTGGCTTGCTGCCGCATCATTCATTTGGCAAGTGCCTAAACAATGTTGGTGGTCAGAACATGGCTCTTTCGTTCTTTCCTGAGTGTGAAAACGATGAAAATGCTAAACCAAAATGGTGGGATCATTTACATTGTGCGATGTCTCACTACAAGTTTGTTCTTGCAATTGAGAACACTTTCACCGAGAGTTATGTGACAGAGAAGTTATTTTACGCGTTGGACTCGGGTGCAGTTCCTATCTATTTTGGTGCACCAAATGTCATGGATTTTGTTCCTCCTCATTCTATAATAGATGGTAGAAAATTCAAATCAGTGGAAGAACTGGCTTCATACGTGAAGGCGGTAGCTAATGACCCGGTAGCTTATGCAGAATACCATGCATGGAGACGGTGCGGTGTAATGGGTAACTATGCGAAAACACGAGCTATGAGCCTTGACACGTTGCCATGCCGGTTATGCGAGGCTGTTAGCAGAAAAGGTGGAAGAAATGCAAGAAGCTAG 1239 0.435 MLVMPQPPKPFNTITITIMIAFTFFLLFLTGFLQFPSISPSLPGPIHDSFTLPSTNTSSKPFTDLVSSFRKWDSQVGCAKFREKTNGVLLNQSKIVSLQEFGGDKVCKGFKMNHVSVLVKGWTWIPDNLDNLYSCRCGLSCLWTKSNVLADKPDALMFESSTPPIQRHVGEPLRAYMDLEAGRKRSGREDIYISYHAEDDVQSTYAGALFHNGRNYHVSNTKSSDVLVYWSSSRCLPQRNELAKKLLGLLPHHSFGKCLNNVGGQNMALSFFPECENDENAKPKWWDHLHCAMSHYKFVLAIENTFTESYVTEKLFYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFKSVEELASYVKAVANDPVAYAEYHAWRRCGVMGNYAKTRAMSLDTLPCRLCEAVSRKGGRNARS* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3561 412 Gene3D - 172 383 IPR038577 -
Mtr1g3561 412 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 101 404 - -
Mtr1g3561 412 PIRSF FucT_plant 5 412 IPR017177 -
Mtr1g3561 412 PANTHER ALPHA-(1,4)-FUCOSYLTRANSFERASE 19 411 - -
Mtr1g3561 412 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 19 411 IPR001503 GO:0006486|GO:0008417|GO:0016020
Mtr1g3561 412 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 225 405 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3561 7 410 Xyloglucan Fucosyltransferase1 AT1G71990 67.327 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3561 K14412 - gmx:100792300 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3561 1 47307305 47310782 Mtr1g3561 1 47307305 47310782 ECH