Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3451 ATGATGCCCCCTGAGCAAGAAAAAACTATTAATGCACCAAATAACAATTCACCCAACACAAACAGAACAGAGAACAGCTCTATACATGGTGAGCCAGATGGTTCTTCTTCTAACAAAGTTAAACCAAGTTTGGATATTGATCACAACGCCATTAATATTCCTTCTCATCCAACTACACCACTCACATCATTTTCTATTCTTCCTCAATCCTTGCGACCAGTTACACTTAAATTTGAAGATGTTTCATACAGCATAACCATGACAAACCAAAAGAAAAATGGCTGCGTCATGGGAAAAGAATCAAAAGTAACAAGAAAAATCCTCAACGGAGTCACCGGAGTAGCAAGACCCGGCGAGTTAACAGCAATGTTAGGACCCTCAGGGAGTGGCAAAACCACCCTACTAACGGCCTTAGCCGGAAGACTTGCCGGAAAAGTCACTGGAACCATAACATACAACGGAAACTCAGACTCATCCTGCATGAAACGCAAAATAGGTTTTGTTTCTCAAGACGATGTAGTTTACCCTCACTTAACGGTGTTGGAAACATTAACCTACACCGCACTCTTGAGACTTCCCAAGACACTTACGCGTGAAGAAAAGGTCGAACACGCGGAGAGGATAATCACCGAGCTCGGCCTAACGCGGTGCCGGAACACTCAGGTTGGCGGCTGTATGGGACTTTTCCGGGGAATCTCCGGTGGAGAAAGAAAAAGGATGAGTATTGGGCAAGAAATGTTGGTGAACCCGAGTTTGTTGTTTTTGGATGAACCAACTTCAGGTTTGGATTCGACCACAGCTCAACTTATTGTTTCGGTTCTTCGGGGTTTGGCTCGGTCCGGTCGAACCGTTGTTACTACTATTCATCAGCCTTCAAGCCGGTTGTATAGGATGTTTGATAAAGTGGTGGTTTTGTCTGATGGGTATCCGATTTACAGTGGTAATGCGGGTCGGGTTATGGATTATCTTGGATCCGTTGGGTTTGTTCCAGGGTTTAACTTTGTTAATCCTGCTGATTTTCTCCTTGATCTTGCTAATGGCATAATTGCTGATGTTAAACATGATGAGATAGAGCAGCATGATCAAGATCAAGCTTCAGTGAAACAGTCATTAATTTCATCCTATAAGAAAAACTTATACCCTGCTCTTAAAGAAGATATTCAGCACATTAACACAGAACCAGTGGTTTTTGCATCAAGAGGAACATCTAGACGTTCTTCTGATAACCAGTGGTGCACTAGCTGGTGGGAGCAATTCAAGGTTCTGCTTAAGAGGGGTTTACAAGAGAGGAGGCATGAATCTTTTTCTGGCTTAAAGATTTTCCAAGTCTTGTCTGTTTCCATTCTCTCAGGACTCCTCTGGTGGCACTCTGATCCCTCACACATTCAAGATCAGGTAGGACTTCTATTCTTCTTCTCCATCTTTTGGGGATTCTTCCCTCTCTTCAATGCAATCTTTGCATTTCCACTGGATAGACCAATGCTAACAAAAGAAAGATCGTCAGGGATGTACCATCTATCATCCTACTATGTTGCTAGGATGGTAGGAGACTTACCAATGGAGCTTGTTCTTCCGACAATTTTTGTAACTATCACCTACTGGATGGGTGGTCTTAAGCCTTCCCTAGTTACATTTGTGTTAACCCTTTTGATAATGCTTTTCAATGTTCTGGTCTCTCAAGGAATAGGCTTAGCACTTGGTGCAATTCTCATGGATGTTAAGCAGGCCACAACTCTAGCTTCAGTGACAATGTTGGTTTTTCTTTTAGCTGGTGGTTACTACATTCAGAAAATGCCTTCTTTTATAGCTTGGTTAAAGTACTTTTCTTTCAGTCATTACTGTTATAAGCTGCTTGTAGGGGTTCAGTTTTCAGTAAATGAGGTTTATGAATGTAGAGAAGGGTTGCATTGTAGGGCAAGAGATTTTCCAGCCATAAAGTGTTTGGAGCTTGGTAATATGTGGGGAGATGTGGCTGCATTGACTATAATGTTTGTTGGATACAGAGTTGTGGCATATTTAGCTTTGAGGAGGGGCAACCTAAATGCCTAA 2049 0.4231 MMPPEQEKTINAPNNNSPNTNRTENSSIHGEPDGSSSNKVKPSLDIDHNAINIPSHPTTPLTSFSILPQSLRPVTLKFEDVSYSITMTNQKKNGCVMGKESKVTRKILNGVTGVARPGELTAMLGPSGSGKTTLLTALAGRLAGKVTGTITYNGNSDSSCMKRKIGFVSQDDVVYPHLTVLETLTYTALLRLPKTLTREEKVEHAERIITELGLTRCRNTQVGGCMGLFRGISGGERKRMSIGQEMLVNPSLLFLDEPTSGLDSTTAQLIVSVLRGLARSGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGNAGRVMDYLGSVGFVPGFNFVNPADFLLDLANGIIADVKHDEIEQHDQDQASVKQSLISSYKKNLYPALKEDIQHINTEPVVFASRGTSRRSSDNQWCTSWWEQFKVLLKRGLQERRHESFSGLKIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRPMLTKERSSGMYHLSSYYVARMVGDLPMELVLPTIFVTITYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQKMPSFIAWLKYFSFSHYCYKLLVGVQFSVNEVYECREGLHCRARDFPAIKCLELGNMWGDVAALTIMFVGYRVVAYLALRRGNLNA* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3451 682 Gene3D - 78 325 IPR027417 -
Mtr1g3451 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 51 678 - -
Mtr1g3451 682 MobiDBLite consensus disorder prediction 1 43 - -
Mtr1g3451 682 SMART AAA_5 117 310 IPR003593 -
Mtr1g3451 682 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 76 332 IPR003439 GO:0005524
Mtr1g3451 682 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 326 IPR027417 -
Mtr1g3451 682 ProSitePatterns ABC transporters family signature. 232 246 IPR017871 GO:0005524
Mtr1g3451 682 Pfam ABC transporter 109 260 IPR003439 GO:0005524
Mtr1g3451 682 Coils Coil 679 682 - -
Mtr1g3451 682 Pfam ABC-2 type transporter 417 623 IPR013525 GO:0016020|GO:0140359
Mtr1g3451 682 MobiDBLite consensus disorder prediction 8 43 - -
Mtr1g3451 682 CDD ABCG_EPDR 73 314 - -
Mtr1g3451 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 51 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3451 Mtr-Chr1 45847415 45851876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3451 106 308 Calmodulin-binding Proteins AT2G36910 30.986 1.61e-14 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3451 1 45847415 45851876 Mtr1g3451 1 45847415 45851876 ECH