Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3446 ATGAAGTGTATCATTAGTAGTGTTATTTTTGTTATGTTCATTCTCTCTATGAATGAAAAATGCTATGGACAAGAAGAAGATGCTACTGTTGTTTCTCCAATGGAGAAAGCAGAACAAGAAGCTCTGTATTCAACCATTCAAGGCTTTGTTGGTAATTCATGGAATGGCTCAGATCTCTATCCAGATCCTTGTGGTTCAACTTCTATTGAGGGAGTTTCTTGTGATATCTTCAATGGACTTTGGTATGTAACAGTAATCAACATTGGACCTATTCATGAAAATTCTCTGCCTTGTGCTAATGAAAAATTGGAATTTAAACCAGAACTATTTCAGCTCAAGCATCTTAAAGCTATATCATTCTTCAACTGTTTTCAATCACCAAATAAGCTTCCGGTTTCAATTCCTACTGGAAATTGGGAGAAACTTGCTGAAAGTTTAGAATCAATAGAGTTTAGATCAAATCCAGGTCTCATTGGTAACATTCCTTCAACTTTTGGTGTACTCAAGAATCTTCAATCATTAGTTTTGCTAGAAAATGGTTTAACAGGTAACATACCACAAGAAATTGGAAATCTTGTAAAATTGAAGAGACTTGTTCTTAGTGGAAACAATTTTAGTGGTAATATTCCAGATATATTTGGAGGGTTAAGTGATTTATTAATCCTTGATTTAAGCAGAAATTCATTATCTGGAACATTGCCTGTGACACTTGGAAGGTTAATTTCAGTATTGAAGCTTGATTTAAGTCACAATTTCTTGGAAGGGAAGTTACTTAATGAATTTGGTAATCTTAAGAATTTGACACTAATGGACTTAAGGAACAATAGATTATGTTGTGGATTGGTTTTATCTTTACAAGAGATGAATTCATTGGAAGAAATGGTTTTATCAAATAACCCATTAGGTGGTGATATAAGAACCTTAAAGTGGGAGAATCTTCAAAATTTGGTGATATTGGAACTCTCTAACATGGAATTGATAGGTGAAATTCCTGAGTCTTTATCACAATTAAAGAAATTGAGATTTTTGGGACTTAGTGATAACAACATTACAGGTAACTTATCACCAAAGCTAGAAACACTTCCTTCTCTCAATGCACTTTACTTAAGTGGAAATAATCTTAAAGGTGAGATTCAATTTTCAAAAGGGTTTTTTGGTAAATTGGGAAGACGTTTTGGGGCTTGGAGTAATCCTAAACTTTGCTATCCATTTGAATTAATGTCAACAAACAATGTTCCTTATGGAGTAAAACCATGTCACCAAGAGGAGATTCATTTGGTAAAATCAAATGCTAAAACTGAAGTGATCAATGGTGATATCAACCATAATTCCAATTTCATAACCTCTATGGGATTTTCTAGCTGTGCTACTAGTTGTTTCTGGTGGATTTTTATGATTTTGGGTCTAGTACTTAGTTTTTTAATTTGA 1428 0.3312 MKCIISSVIFVMFILSMNEKCYGQEEDATVVSPMEKAEQEALYSTIQGFVGNSWNGSDLYPDPCGSTSIEGVSCDIFNGLWYVTVINIGPIHENSLPCANEKLEFKPELFQLKHLKAISFFNCFQSPNKLPVSIPTGNWEKLAESLESIEFRSNPGLIGNIPSTFGVLKNLQSLVLLENGLTGNIPQEIGNLVKLKRLVLSGNNFSGNIPDIFGGLSDLLILDLSRNSLSGTLPVTLGRLISVLKLDLSHNFLEGKLLNEFGNLKNLTLMDLRNNRLCCGLVLSLQEMNSLEEMVLSNNPLGGDIRTLKWENLQNLVILELSNMELIGEIPESLSQLKKLRFLGLSDNNITGNLSPKLETLPSLNALYLSGNNLKGEIQFSKGFFGKLGRRFGAWSNPKLCYPFELMSTNNVPYGVKPCHQEEIHLVKSNAKTEVINGDINHNSNFITSMGFSSCATSCFWWIFMILGLVLSFLI* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3446 475 SUPERFAMILY L domain-like 44 378 - -
Mtr1g3446 475 PANTHER PIRIFORMOSPORA INDICA-INSENSITIVE-LIKE PROTEIN 22 467 - -
Mtr1g3446 475 Gene3D Ribonuclease Inhibitor 308 398 IPR032675 -
Mtr1g3446 475 Gene3D Ribonuclease Inhibitor 35 307 IPR032675 -
Mtr1g3446 475 PRINTS Leucine-rich repeat signature 219 232 - -
Mtr1g3446 475 PRINTS Leucine-rich repeat signature 361 374 - -
Mtr1g3446 475 PANTHER RECEPTOR-LIKE PROTEIN 14 22 467 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3446 153 440 Receptor kinase-like Gene Family AT1G17750 34.462 4.57e-33 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3446 1 45798415 45801313 Mtr1g3446 1 45798415 45801313 ECH