Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3431 ATGCAGCGTTTTAAAATGGGTTTCTCTGATTACATCCAAGCATTAGAACAAGAACGTCGTAAGATTCAAGTCTTTCCTAAAGAACTTCCTCTTTCTTTAGAACTCGTTACACAAGCTTGTAGACAACAATTGTCTGGAACAACAACTGAGTATAATTTGAATGGACAATCTGAGTGTTCTGAACAGACAACATCAACAGATGGACCTGTTTTGGAAGAGTTTATTCCAATTAAGAAAAGGGCTTCTTCTTATTCTCAAGAAGTGTTTGATGATGTGGAAGATTATGATCAACATTTTCATCATAAGCAACAAAAACTTTCTTTGGATAATAAGAAAAAATCCGATTGGCTTAGATCTGTTCAGTTATGGAATTCAGATCCTTCATCTGAAGAGGATGTTACTAAGAAAGCAGTGCCTGTGTTGGAATTGAAGAGAAATGGATGTGGGGGTGGTGCTTTTCATCCATTCCATAAAGAAGATAGAGTTAACAACACGACAAGTGAATTGTTGAGTAAAGGACAACCTTCTTCGACCGGTGTAGCTGCCGTGAGTTCTAATGCGGCTACTGTCACCAGTAACAATGTTGAAAACAGAAAAAGAGATGAGAAAGAGGAAAAGAGAAAACAGCGACGGTGCTGGTCGCAGGAGTTGCACAAGCGATTCCTGAAGGCGCTTCAGCAGCTTGGTGGTGCAGATTGTGCCACACCAAAGCAAATCAGAGAGGTAATGAATGTTGATGGCCTCACAAATGATGAAGTCAAAAGCCATTTACAGAAATACCGGTTGCATACTAGAAGACCAAGTTCAACAAATAACGAAAGTGCCAATTCACAAACAGCAGCACCTTTTGTCCTTGTAGGAAACATTTTTGTCCAACAACAAGAGTATGGTGGGGTAGCTTCATCAACAACAACAGGGGAAATGACAAAAGTTGTGGCACCTTCTGGAATCTATGCACCAGTAGCCACACATCCTCAAGTTGCTACAATTAAAAAACCAGAGTTTAAGAAGTTTGAGCATTCAATCTCAGAAGAAAGGGGTAATAACAGTGAAGGTGCTGTTCATTCAAATTCACCTACATCTTCATCCTCTACACATACTACTACAAATGCTTCCACTGGCTATTGA 1128 0.3972 MQRFKMGFSDYIQALEQERRKIQVFPKELPLSLELVTQACRQQLSGTTTEYNLNGQSECSEQTTSTDGPVLEEFIPIKKRASSYSQEVFDDVEDYDQHFHHKQQKLSLDNKKKSDWLRSVQLWNSDPSSEEDVTKKAVPVLELKRNGCGGGAFHPFHKEDRVNNTTSELLSKGQPSSTGVAAVSSNAATVTSNNVENRKRDEKEEKRKQRRCWSQELHKRFLKALQQLGGADCATPKQIREVMNVDGLTNDEVKSHLQKYRLHTRRPSSTNNESANSQTAAPFVLVGNIFVQQQEYGGVASSTTTGEMTKVVAPSGIYAPVATHPQVATIKKPEFKKFEHSISEERGNNSEGAVHSNSPTSSSSTHTTTNASTGY* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3431 375 MobiDBLite consensus disorder prediction 347 375 - -
Mtr1g3431 375 MobiDBLite consensus disorder prediction 195 210 - -
Mtr1g3431 375 SUPERFAMILY Homeodomain-like 206 266 IPR009057 -
Mtr1g3431 375 MobiDBLite consensus disorder prediction 340 375 - -
Mtr1g3431 375 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 371 IPR044787 GO:0003700|GO:0006355
Mtr1g3431 375 MobiDBLite consensus disorder prediction 190 210 - -
Mtr1g3431 375 Gene3D - 207 265 - -
Mtr1g3431 375 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 205 265 IPR017930 -
Mtr1g3431 375 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 371 - -
Mtr1g3431 375 Pfam Myb-like DNA-binding domain 210 261 IPR001005 -
Mtr1g3431 375 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 208 263 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3431 Mtr-Chr1 45578315 45580502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3431 10 323 G2-like Transcription Factor Family AT1G68670 47.590 2.45e-76 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr1g3431 Myb_DNA-binding 3.5e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3431 1 45578315 45580502 Mtr1g3431 1 45578315 45580502 ECH