Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3428 ATGGTTTCCACTCCTTCTCTACCTTCTAAGGAAACTCAATCAGAACAAAAAGAGGTGGAGAATGGCCCCGCTCGCCGAGCCAAATGGTGGTACTCGACTTTCCACACGGTGACAGCCATGATAGGTGCCGGTGTTCTCAGCCTGCCATATGCCATGGCATATTTAGGATGGGGTCCAGGGATCTTGATGTTGTTACTATCATGGTGTCTAACATTAAACACAATGTGGCAAATGATCCAGCTACATGAATGTGTTCCGGGAACTCGTTTCGATCGTTATATTGATCTTGGTAGACATGCTTTTGGACCAAAACTTGGAGCATGGATTGTTCTACCTCAGCAACTGATTGTACAAGTTGGGTGTGACATTGTGTATATGGTTATTGGTGGGAAGTGTCTAAAGCAGTTTGTGGAGATAGCATGCACTGATTGTACACAAATCAAGCAATCTTATTGGATTATGATTTTTGGTGGCATCCATTTTTTTCTGTCTCAGCTTCCTAATTTCAATTCTGTTGCTTGTGTTTCTTTAGCAGCAGCTGTGATGTCATTAAGTTATTCAACTATAGCATGGGTGGCTTGCTTACCTAGAGGCCGGATTGACAATGTTAGCTATGCATACAAACCAATCAGCAAAACTGATTTATTGTTCAGAGTCTTCAATGCACTTGGTCAAATATCATTTGCATTTGCTGGCCATGCAGTGACCCTTGAAATTCAAGCTACGATTCCATCAACACCTGAAAAACCATCAAAGATAGCAATGTGGAATGGTGCTATTTGTGCCTATTTCATCAATGCAATATGTTATTTCCCAGTTGCAATCATTGGATATTGGACTTTTGGACAAGATGTTAATGATAATATACTAATGTCACTTGAAAAACCTTCATGGCTTATTGCCTCTGCTAACTTGATGGTATTCATCCATGTTGTTGGTAGCTATCAGGTTTATGCAATGCCTGTTTTTGATTTGATTGAGAGGATGATGATGCGAAGATTGAACTTCCCTCCCGGTGTAGCGCTTAGACTTGTAGCTCGATCTGCTTATGTAGCTTTTACATTATTCTTTGGAGTCACTTTTCCATTCTTTGGTGATCTTCTTGGATTCTTTGGTGGATTTGGTTTTGCTCCCACTTCATATTTTCTTCCTAGCATAATGTGGATGATAATCAAGAAACCAAAGAAATTCAGCATCAACTGGTTCATCAATTGGGCTGGAATTTACATAGGTGTATGTATTATGCTGGCATCAACAGTTGGTGGCTTGAGGAACATTATTGCTGATTCATCCACTTATAGTTTCTATACCTAA 1314 0.4011 MVSTPSLPSKETQSEQKEVENGPARRAKWWYSTFHTVTAMIGAGVLSLPYAMAYLGWGPGILMLLLSWCLTLNTMWQMIQLHECVPGTRFDRYIDLGRHAFGPKLGAWIVLPQQLIVQVGCDIVYMVIGGKCLKQFVEIACTDCTQIKQSYWIMIFGGIHFFLSQLPNFNSVACVSLAAAVMSLSYSTIAWVACLPRGRIDNVSYAYKPISKTDLLFRVFNALGQISFAFAGHAVTLEIQATIPSTPEKPSKIAMWNGAICAYFINAICYFPVAIIGYWTFGQDVNDNILMSLEKPSWLIASANLMVFIHVVGSYQVYAMPVFDLIERMMMRRLNFPPGVALRLVARSAYVAFTLFFGVTFPFFGDLLGFFGGFGFAPTSYFLPSIMWMIIKKPKKFSINWFINWAGIYIGVCIMLASTVGGLRNIIADSSTYSFYT* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3428 437 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 6 10 433 - -
Mtr1g3428 437 PANTHER OS05G0424000 PROTEIN-RELATED 10 433 - -
Mtr1g3428 437 MobiDBLite consensus disorder prediction 1 21 - -
Mtr1g3428 437 Pfam Transmembrane amino acid transporter protein 26 421 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3428 Mtr-Chr1 45545541 45549971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3428 10 436 Organic Solute Cotransporters AT1G25530 75.058 0.0 647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3428 1 45545541 45549971 Mtr1g3428 1 45545541 45549971 ECH