Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3313 ATGACATGGTTGGGATTGAGTTCAAATGGGACCAGAGCTTCCTTGGTCATCTCTGTCATAGCTTTCTCTTTGCTCGTATTAACACTTAGCTTAAACTCTGGTCATTTTGATTGGTTATCAAAAGGGAATATTGTAGATTGGTTTTCAAAAGGGAATATTGTACTAAGTCAAAGAAATCAAAGCACCATGTGTAATGTGACAAATCTTGGTTCAAAAAATAGTTCATCTCCATCAACTAAAAGTCATGCTGACAATGACATACTCCTTGATGGACTTCTCTCTTCTGGATTTGATAAAGGATCATGCTTAAGCAGATACCAATCTTACTTATACCGCAAGGTATCGCCTCATAAACCTTCTCCGTATCTCATATCCAAACTTCGTAGCTATGAAGATCTTCACACAGGATGTGGACCTCATACTAGAGCTTACAAGAGAACCATGGTAAAGCTCAGTAGGTTCAAATCCAATGTTACTACTGGATGTCAGTACATAATATGGACATATGCCAATGGCTTAGGAAACAGAATGGTGAGCATGATTTCAGCATTCCTTTATGCAATCCTCACCGATCGAGTCCTATTGGTGGAGTTTAATGATGACATGGTTGACCTATTTTGTGAACCATTCCCCAATTCAACATGGATATTGCCTAAAGATTTCCCTTTTAGTGAACACAAAGGACATCATTTTGAAACTTATCAAAACATTTTGAAAAAGGATAGGGAAAACAATTCAACTGAGTTCTTATTACCATCAGTTATGCATCTCAATTTACAACACACAAGTCATGATCATGAAAAGTTTTTCTCTTGTGATCATAGTCAATATCTTCTACATAAGGTACCCCTCTTGATTTTAAGATCAGATCAATATTTTGTACCTTCTCTTTTTATGGCTCCATCCTTCAACCAAGAGCTTAACAAAATGTTCCCAAACAAAGACACGGTTTTTCATCATTTGGGACGCTACCTATTTCAACCTTCAAATGATGTATGGGGACCAATCAAAAGGTTCTATAAAGCATATATGGACAAGGCAGATGAGAAGATTGGGATCCAAATAAGAGTATTTAATCCTAATCTCACTCCATATCAAACAATCATGAATCAAGTTTTGAGTTGCAGCCAAAAGCATAAGATACTACCTGATTTCGCCACAAATATTTCAGAAGTGTCTCCATCGAATAATCAGATTTTGAAGTCTGTTTTGGTAACATCTTTATATCCAGAGTATGGTGAGAATCTTAGGACTATGTATTTGAACAAACCAACTGTTACAGGAGAAAGCATAGGGGTTTATCAGCCAAGTCATGAAGAGAATCAAAAGTTTGGTGATAACTTGCACAACAAGAAAGCATGGACAGATATATACCTATTGAGTTTATGTGATGTTTTGGTTACTAGCGCTTTATCAACTTTTGGGTATGTGGCTCAGAGTTTGGGAGGCATAAAGCCGTGGGTTCTTTACAAATTAATAGACGCCAAAGTCCCGGATTCGCCTTGCGTTCAAGATGTCTCTATGGAGCCTTGTTTTCATATACCTCCTAAACATGATTGCAAGGAAAAACCCTTGGATGATATTGGCACAACTTTTCCATACATGAGGAGATGTGTGGATTTTGGATCGGGTATAAAGTTGATCAATGATCTTCAGTAG 1659 0.3725 MTWLGLSSNGTRASLVISVIAFSLLVLTLSLNSGHFDWLSKGNIVDWFSKGNIVLSQRNQSTMCNVTNLGSKNSSSPSTKSHADNDILLDGLLSSGFDKGSCLSRYQSYLYRKVSPHKPSPYLISKLRSYEDLHTGCGPHTRAYKRTMVKLSRFKSNVTTGCQYIIWTYANGLGNRMVSMISAFLYAILTDRVLLVEFNDDMVDLFCEPFPNSTWILPKDFPFSEHKGHHFETYQNILKKDRENNSTEFLLPSVMHLNLQHTSHDHEKFFSCDHSQYLLHKVPLLILRSDQYFVPSLFMAPSFNQELNKMFPNKDTVFHHLGRYLFQPSNDVWGPIKRFYKAYMDKADEKIGIQIRVFNPNLTPYQTIMNQVLSCSQKHKILPDFATNISEVSPSNNQILKSVLVTSLYPEYGENLRTMYLNKPTVTGESIGVYQPSHEENQKFGDNLHNKKAWTDIYLLSLCDVLVTSALSTFGYVAQSLGGIKPWVLYKLIDAKVPDSPCVQDVSMEPCFHIPPKHDCKEKPLDDIGTTFPYMRRCVDFGSGIKLINDLQ* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3313 552 PANTHER FUCOSYLTRANSFERASE 2-RELATED 58 551 IPR004938 GO:0008107|GO:0016020|GO:0042546
Mtr1g3313 552 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 58 551 - -
Mtr1g3313 552 Gene3D - 159 213 - -
Mtr1g3313 552 Gene3D - 334 486 - -
Mtr1g3313 552 Pfam Xyloglucan fucosyltransferase 64 521 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3313 Mtr-Chr1 44346131 44347962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3313 1 548 Xyloglucan Fucosyltransferase1 AT2G03220 47.464 2.62e-169 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3313 K13681 - gmx:100818288 598.971