Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2905 ATGAGTGAAAGAGGGAAGAAAGAGAGAATGAAGAACATCTTCAAGAAGCTTCATATAGGTGGCAGTAACAACCATGATCCTAATCGATCCAATGATACTCCGCCACGTGTACCATCGCCAACCGATGACGCTCAGAGTTCCGCCGCCGCTGCTTCTACATTAACTCCTTCTTCCTCTTCGCCGTCGGCGACAGGAGTTGCTGCTGCTGCTTCCGGTGGTGGTGGTTTGTCTGCGATGGTTAATCGGCAGGATTTTTTCTCGTCGGAGGAGGAGTTTCAGGTGCAGTTAGCCCTAGCTATTAGTGCTTCCAATTCAGAGTTTCGTGGTGGTGATGATCCGGAGAAGGATCAGATCCATGCGGCGACCATGCTTAGTTTGGGAGGAAATCGAATTGATTCGACGCGGAGTAAGGATGATGTGGCGGAGGCACTTTCCAGGCAGTATTGGGAATACAATGTGCTTGACTATGAAGAGAAAGTAGTAGATGGTTTTTATGATGTATATGGGCTCTCTAATGACCCGGCAATGCAAGGAAAGATGCCATCTCTAGCAGATCTTGAAGCAAACCCAGGTGATTCTAGCTTTGAAGTGGTCATAGTTAATCAAACAATCGATCCTGCACTCGAAGAGCTGGTGCAAATTGCACAATGTATATCATTCGATTGCCCTGTCACCGAGATTGGTATTTTGGTACAAAGGCTTGCTGAACTAGTTACCAGCCATATGGGTGGCCCTGTAAAGGATGCTAATATTATATTGGCAAGATGGACTGAAAGAAGTACACAGTTAAGGACATCTCTTCACACAAGTGTATTACCTCTTGGGTCCTTAGATATTGGGCTCTCTAGGCATCGTGCTTTACTTTTCAAGATATTAGCAGACAACATTAAGATGCCTTGTAGACTGGTTAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTAGTTGATCTCATGGCTGCTCCTGGAACACTCATCCCGGCTGATATTTTAAATGCAAAGGATAATGCTTTTAAGCCTTACAACCCCAAGACTGTGGTGAGTGTGCCTTCCAGTGTGGAAACTGAGCTTTCTTACTCAAAACCTATACTACCATCTAATGGTGAAGGCAGTAGTCAAACTTCTGCGATAAAAGGTCATACACCGTCTTGGAATGGAAAATCGTATACCGAGAAGTCAGAGTATATGCCTTCAAACTTTGGTTTGAGCACAGACGCTGGTGTTGGTCCTTCTAAAATTCCCAATAAAGGCAGTCCTAATCAACGGGAAAATTTGCCACCCTCATATGGTAATTCTCTGTACAAAGGTACTCTTGGAATGAATGCAGTTGGTGATGGGACAAGATTGAATGTCAATGTTGTGCCATATGCACAGAACAACCACAACGACCCTCAGAACCTTTTTGCAGATCTGAACCCTTTCTTGATAAAAGGGACTGGGAAGTCCTCTGTGCATAACAAACCTGTGGAAAATAAACCTCTTGAGTACGGTACAAAAAACAATACTATTTCTGGTCGACCCGTGTCGCCATTGATGTGGAAGAATCGGCATGCCTTCAACGAAGTCCCTAGGAAAACTAATCAGAACCCTAATGAATATAAACCTCCTTTATTTGTTTCCAATATTTCTTCCACATCTGGAAATACTGATCTCAGCACTTCCAATTCATCATACAATTCAAATATAAATAATCATATTAGTTCTCAAACTTCGGCACAAATTACTGGTTCAGTCTCTCCAGCTGGTATAAGTGAACTGAACCGGACTGAGGGTCTCAATGCTGATTTTAAAAGGGTTGGTTTGGGAAGTTCTCAAAATGTCATGTTAGATGCGGTTTACGAACCCGAAAACACCGAGCTCAGACATCATGACAGGAGGAAGTGCACACATGACAGATTCATGGGAAGCAATTTCCAATTAAAAGATTCAGATAGACCTATCTCTTCAATCGATTCCATTACAAATAGGGCCGATCAAATATTGGACGATGCAGATGTTGGTGAATGTGAGATTCCATGGGAAGATCTGGTTATTGGTGAAAGAATTGGTCTAGGTTCATATGGCGAGGTCTACCGTGCAGACTGGAATGGCACAGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCAGGCGCTGCCTTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGCTGCGTCATCCAAATGTTGTTCTTTTTATGGGTGCTGTCACCCGGCCGCCTAACCTCTCAATCATTTCAGAGTTTCTCCCAAGAGGAAGCTTGTACCGAATTCTTCATCGGCCAAATTGTCAGATTGATGAGAAACAAAGAATAAAAATGGCTCTGGATGTGGCTAGGGGTATGAATTGCTTGCACGCCAGCACACCTACAATTGTTCACCGAGATCTGAAGTCCCCAAATCTTTTAGTTGATAATAATTGGAATGTTAAGGTATGCGATTTTGGGTTGTCAAGATTGAAGCATAACACATTTTTATCATCCAAATCAACTGCTGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAGCCTTCGAATGAGAAGTGTGATGTTTACAGTTTCGGTGTTATCCTATGGGAGCTTGCCACTCTTAGGTTGCCATGGAGTGGAATGAATCCTATGCAAGTTGTTGGGGCCGTAGGTTTCCAAAATCGTCGCCTTGAAATTCCTAAGGAACTTGATCCTTTAGTTGCAAGAATAATCTGGGAGTGTTGGCAACAGGATCCAAATTTGCGCCCCTCCTTTGCACAGCTCACAGTGGCTCTTAAGCCCTTGCAGCGTCTGGTTATCCCATCTTATCAGGACCAGGTAGCTTCACCTCTGCCTCAGGAGATTTCTGTAAATTCTACCCCATGA 2913 0.4363 MSERGKKERMKNIFKKLHIGGSNNHDPNRSNDTPPRVPSPTDDAQSSAAAASTLTPSSSSPSATGVAAAASGGGGLSAMVNRQDFFSSEEEFQVQLALAISASNSEFRGGDDPEKDQIHAATMLSLGGNRIDSTRSKDDVAEALSRQYWEYNVLDYEEKVVDGFYDVYGLSNDPAMQGKMPSLADLEANPGDSSFEVVIVNQTIDPALEELVQIAQCISFDCPVTEIGILVQRLAELVTSHMGGPVKDANIILARWTERSTQLRTSLHTSVLPLGSLDIGLSRHRALLFKILADNIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPADILNAKDNAFKPYNPKTVVSVPSSVETELSYSKPILPSNGEGSSQTSAIKGHTPSWNGKSYTEKSEYMPSNFGLSTDAGVGPSKIPNKGSPNQRENLPPSYGNSLYKGTLGMNAVGDGTRLNVNVVPYAQNNHNDPQNLFADLNPFLIKGTGKSSVHNKPVENKPLEYGTKNNTISGRPVSPLMWKNRHAFNEVPRKTNQNPNEYKPPLFVSNISSTSGNTDLSTSNSSYNSNINNHISSQTSAQITGSVSPAGISELNRTEGLNADFKRVGLGSSQNVMLDAVYEPENTELRHHDRRKCTHDRFMGSNFQLKDSDRPISSIDSITNRADQILDDADVGECEIPWEDLVIGERIGLGSYGEVYRADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIISEFLPRGSLYRILHRPNCQIDEKQRIKMALDVARGMNCLHASTPTIVHRDLKSPNLLVDNNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIWECWQQDPNLRPSFAQLTVALKPLQRLVIPSYQDQVASPLPQEISVNSTP* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2905 970 MobiDBLite consensus disorder prediction 1 72 - -
Mtr1g2905 970 Gene3D Transferase(Phosphotransferase) domain 1 768 950 - -
Mtr1g2905 970 Pfam Protein tyrosine and serine/threonine kinase 690 939 IPR001245 GO:0004672|GO:0006468
Mtr1g2905 970 SMART serkin_6 689 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2905 970 MobiDBLite consensus disorder prediction 374 442 - -
Mtr1g2905 970 SUPERFAMILY Protein kinase-like (PK-like) 680 961 IPR011009 -
Mtr1g2905 970 CDD STKc_MAP3K-like 695 938 - -
Mtr1g2905 970 ProSitePatterns Protein kinases ATP-binding region signature. 695 717 IPR017441 GO:0005524
Mtr1g2905 970 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 76 962 - -
Mtr1g2905 970 Gene3D Phosphorylase Kinase; domain 1 682 766 - -
Mtr1g2905 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Mtr1g2905 970 ProSiteProfiles Protein kinase domain profile. 689 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2905 970 Pfam Ethylene-responsive protein kinase Le-CTR1 141 339 - -
Mtr1g2905 970 MobiDBLite consensus disorder prediction 494 522 - -
Mtr1g2905 970 MobiDBLite consensus disorder prediction 374 413 - -
Mtr1g2905 970 MobiDBLite consensus disorder prediction 427 442 - -
Mtr1g2905 970 MobiDBLite consensus disorder prediction 23 66 - -
Mtr1g2905 970 PRINTS Tyrosine kinase catalytic domain signature 763 776 IPR001245 GO:0004672|GO:0006468
Mtr1g2905 970 PRINTS Tyrosine kinase catalytic domain signature 802 820 IPR001245 GO:0004672|GO:0006468
Mtr1g2905 970 PRINTS Tyrosine kinase catalytic domain signature 849 859 IPR001245 GO:0004672|GO:0006468
Mtr1g2905 970 PRINTS Tyrosine kinase catalytic domain signature 868 890 IPR001245 GO:0004672|GO:0006468
Mtr1g2905 970 PRINTS Tyrosine kinase catalytic domain signature 912 934 IPR001245 GO:0004672|GO:0006468
Mtr1g2905 970 PANTHER SERINE-THREONINE PROTEIN KINASE 76 962 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2905 Mtr-Chr1 40264165 40272947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2905 10 925 MAP Kinase Kinase Kinase AT1G08720 55.344 0.0 950
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mtr1g2905 PK_Tyr_Ser-Thr 4.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2905 - - aprc:113870732 1514.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2905 1 40264165 40272947 Mtr1g2905 1 40264165 40272947 ECH
Mtr1g2905 1 40264165 40272947 Mtr7g2984 7 46679966 46682145 PCT