Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1448 ATGCATAACATTAGTCTAAACATGCCACCAATGTCTCAAACATTCGACCCCGAAGACATTCTCAAAAACCGTTGCATATTAGTGAATGGACCTGTTATAGTTGGAGCTGGTCCATCAGGCTTAGCAGTTGCAGCTTGTTTGAAAGACCAAAATGTTCCTTTTGTCGTCCTCGAACGAGCTAACTGCATTGCCTCGCTTTGGCAGAATCGAACCTACGATCGTCTTAAACTTCATCTTCCTAAACAATTGTGTCAACTACCCAATTTTCCATTCCCTGATCACTTCCCTGAATACCCTTCAAAATTTCAGTTCATAAGTTACCTCGAATCATATGCGAAAAACTTTAACATAACACCAAATTTCAATGAAACAGTGCTTTCTGCTAAGTATGATGAAACCTTTGGTCTTTGGAGGATTAAGAGCAATAGGATAAAAAGTGATAAAGTTGTTGAAGTTGAGTATATTTGTAGGTGGCTTGTGGTTGCTACCGGTGAAAACTCGGAGAAAGTTGTGCCGGAATTTGAAGGTTTGAGTGATTTTGGTGGAAATGTTATGCATGCTTGTGACTATAAATCTGGTGTGAATTATAGTGGAAAAAATGTTCTTGTTGTTGGATGTGGAAATTCTGGCATGGAAGTTTCTCTTGATCTTTGTAACCATAATGCAAATCCATCAATGGTTGTTCGAAGTTCGGTTCATGTGTTACCGAGGGAAATATTCGGAAAATCAACTTATGAGGTAGCTGTTATGTTGATGAAAAGGTTACCAATTTGGATGGTCGATAAGATATTGCTTGGTCTAACTCGTGTGATTTTGGGAAATGTCGAAAAGTATGGTCTAAAAAGGCCATGTATGGGACCTTTAGAGCTTAAGAACACTTCCGGGAAGACACCGGTTTTAGATATCGGAGCACTTGAGAAAGTTAGATCTGGTGAAATTAAAGTTGTTTCTGGAATAAAGAGATTTTCACAAGGGAAAGTTGAACTTGTTGATGGAAAAGTTCTTGATATTGATTCTGTTGTTCTTGCTACTGGCTATAGAAGCAATGTACCATCTTGGCTTAAGGAGAATGAATTTTTTTCCAAAGATGGAATGCCAAAAGATCCATTTCCAAATGGATGGAAAGGAAATGCTGGTCTATATGCTGTTGGATTTACAAGGAGAGGACTCTCTGGTGCTTCATTGGATGCAATTAGTGTGTCTCAAGACATTGCTAAAAGTTGGAAAGAAGAAAATAAACAAAGAAAGAAAACAGTGGCTGCACGTCATAGGAGATGCATATCACACTTCTAA 1293 0.3836 MHNISLNMPPMSQTFDPEDILKNRCILVNGPVIVGAGPSGLAVAACLKDQNVPFVVLERANCIASLWQNRTYDRLKLHLPKQLCQLPNFPFPDHFPEYPSKFQFISYLESYAKNFNITPNFNETVLSAKYDETFGLWRIKSNRIKSDKVVEVEYICRWLVVATGENSEKVVPEFEGLSDFGGNVMHACDYKSGVNYSGKNVLVVGCGNSGMEVSLDLCNHNANPSMVVRSSVHVLPREIFGKSTYEVAVMLMKRLPIWMVDKILLGLTRVILGNVEKYGLKRPCMGPLELKNTSGKTPVLDIGALEKVRSGEIKVVSGIKRFSQGKVELVDGKVLDIDSVVLATGYRSNVPSWLKENEFFSKDGMPKDPFPNGWKGNAGLYAVGFTRRGLSGASLDAISVSQDIAKSWKEENKQRKKTVAARHRRCISHF* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1448 430 PRINTS FAD-dependent pyridine nucleotide reductase signature 31 50 - -
Mtr1g1448 430 PRINTS FAD-dependent pyridine nucleotide reductase signature 156 174 - -
Mtr1g1448 430 PRINTS FAD-dependent pyridine nucleotide reductase signature 200 218 - -
Mtr1g1448 430 Pfam Flavin-binding monooxygenase-like 33 351 IPR020946 GO:0004499|GO:0050660|GO:0050661
Mtr1g1448 430 PRINTS Pyridine nucleotide disulphide reductase class-II signature 30 52 - -
Mtr1g1448 430 PRINTS Pyridine nucleotide disulphide reductase class-II signature 196 220 - -
Mtr1g1448 430 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 16 428 - -
Mtr1g1448 430 SUPERFAMILY FAD/NAD(P)-binding domain 198 384 IPR036188 -
Mtr1g1448 430 Gene3D - 31 410 IPR036188 -
Mtr1g1448 430 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 16 428 - -
Mtr1g1448 430 SUPERFAMILY FAD/NAD(P)-binding domain 32 232 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1448 Mtr-Chr1 17884336 17886395 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1448 K11816 - gmx:100818345 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1448 1 17884336 17886395 Mtr1g1448 1 17884336 17886395 ECH
Mtr7g2984 7 46679966 46682145 Mtr1g1448 1 17884336 17886395 PCT