Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1196 ATGGCTCCATGGCGCCGACGTGGAGCAAATAAAGCCAAGGCCAATGCGCACTTGACCCTCGGCGATCTCGTTCTCGCTAAGGTTAAAGGTTTCCCCGCTTGGCCTGCAAAAATAAGCAGGCCTGAAGATTGGGAAAAAAAACCTGATCCGAAGAAATTTTTTGTTCAATTTTATGGGACCGAAGAAATAGCTTTTGTCCTCCCTGCTGATATTCAGGAATTCACCAACGAGGTCAAAACTAAGACGATTGCTCGGTTGCATGGTAAGACGAAGTGCTTTACCCAAGCTGTGAGGGAAATCTGCGCAGAATATGATGAGTTAGAGAAACAGAGAGCTGGTGGTTTGACAGATGACACTGATGATGCACGTGTTGGGTCAGAGGCCCCTTCTTTTGATGGGGTAGTGGATGATGTAAAGGATGTTACTGATGCTGTGGTATCAAATGTAGAAAAAGCGAAGACTGTTATGGAAGATGTTGGCTCAAATTTGGAGCACCATGAACAAAGATGTGGAGAAACTGATTGCCAGGATGAAAAGCCTTCTACATCTGGCCGTGCAACTGACGGTTCATCTCCTGTTTTGTCACCTGTGTTGGAAAGTAAATCATCCATTGGTACAGAACTAAACAAGCACAATATCAAATCAGGCCTTGAGGATAAATCATGTCGAAAGAATGAAGTTTCTGATATTAAGGATTTTTGCAAAGTTAACGACTTCAAGCATGATGATAATGCACAGAGTGTTTCTACTGATGGGAACAAGGCAAGAAAGCTTGTTACTAGCTCAAGGAAGAGAAGCGAAGTTGCAGCTGATAAAGAAATAAGTGGATTTGATATAGCATTTTCAAAGGGTGAAAAATCTGCAGGCCATGCTAATCTTTTCAGGTCTAGAGAGACAATGAAAGATGGGAAAAGGGGGAAAAATGCTTTCTCTGTCGATTCTGAAGATGCTCCTAAATCAGATCCAGGTATTAACAGCGGAAATAAAGATAAGAACTTGCTGAAAGCTAAAACAAGCCTTAAGGTAAAAAATGAGTTGCAGGAGAGTTTTGTTGATTCTGAGGAGGCTGATAGAACAAATTCTTTCAAGAAAAACAAGACCCAAGTTCAAGGAAAGAATAATTGGGGACTGAATGAAACTTTACATGCCACCAAGAAGCTCAAGAGTATAGATGTCAAAGACAGAAAAACGTTAAATTCTCTCTCTGAAGATATGAAGAGTGCTTCACCTGTCTTCCCCATTGATTCTGAGGAGGCTGATAGAAAGAATTCTTTTAAGAAAAACAAGACCCAAGTTCAAGGAAAGGGTAATTTGGGAACAAATGAAACTTTACATGCTACTGAGAAGTTAAAGCGTATGGATGTCAAAGACAACGAACCTTTAAATTCTCTCCCTGAAGATATGAAGAGTGTCTCACCTGTCTTAACTGTTGATTCTGAGGAGGCTGATAGAAAGAATTCTTTTAAGAAAAGCAAGACCCAAGTTCAAGGAAAGCGTAATCTGGAAACAAACGAAACTTTACATGCTACCAAGAAGTTAAAGCGCATGGATGTCAAAGACAACAAAGCTTCAAATTCTCTCTCTAAAGATATGAGGAGTTCTTTGCAAGTCTTTCCTGTTGATTCTGAGGAGGCTGATAGAAAGAATTCTTCTAAGAAAAGCAAGACCCAAGTTCAAGGAAAGGGTAATTTGGGAACAAATGAAACTTTATTTGCTACTGAGAAGTTAAAGCGTATGGATGTCAAAGACAACAAACCTTTAAATTCTCTCCCTGAAGATATGAAGAGTGCTTCACCTGTTTCTACTGTTATAGGTAACAAGGCATTGAAAAAAACAGAGTTGAAAAGGTCTTCTTCAAGTTTGAAAACAGAGAAAGGGTTGTCATCTAGGGCTCAGACTGCTAAAGTAGATTCCAATGATTCTGTTTGTGAAGTGCTGACTGGTACAAAACATCATAGTCAAGAACGGAAAGCTTTGCCTCATTCTGCTAATCTTTCTTCTGATCAACATGCAGAAATGAGTTCTACTAGACTGAAAGGGGATGCAGATAATCTTGCAGTTAAACAACTACAGAGGAAACGCAGAGCTGTTTGCCTTGGGGAGGATGATGATGATGAATCCAAGACTCCTGTTCATGGAGGAGCTTCTAAAACTATTAGATCACCCTCTCTTGTTTCAGAGGCTGTGAAGAGCAATGATCCGTTGTTAGAGAATGCCGATGTTTCTCAGCTGAATAAGGAAAAACCTGGTACACCTGAGGATAGCCATTTGAAAGGACATTTAACTAAATTATGTAATGTCTCTTTGCCTACAAGGCATCCTCAAAAAGAGAATGCTGATGAAGTTGTTGCTGTCAATTCACCTCACAGTCCTGAGCAATTAAATAGAAAGCGTTTTCCTTCGAATGTGGAAAAATTAAGCTCAATCTCTCCAGTAAATTTCCCTAAGTCTCTTCCCACAACAAAATCAAATGCTGAGCGACATAAATCTTCCAAAGCTTTGCCTAAAGTCAGTAATACTACTCAAAAGAAGGCTGATAATGGGTCTTCAAAGAGTTTAATTAGCACCAACACTTTGCAGAGTCAAGTTATAACTCATAAAAAGAAGCCTACGTCTTATGTTGAAAGGTCCAAAACTACACCAAAGACATCACCGCAGTCGGTTGAAGTTCATACTGCAACAGAAAATTTAAAGGAACTTGATGTTTTTCATGTTGATAGATTAGAGTTGGGCACAGAAGAAAAAAGTAGCCTATATGTTGGTTCTGGGACTCCAGAAAATGCCAACACTATGAAGCATCTTATTGCAGTTGCCCAGGCAAAAAGGAGACTAGTAGCGCAATATCAGTGTCATCCTTTTGACCTTCATTATGCTCAAGTGGGAACACCTAGCCCCTCTATGGCGCAGCCATTTCTGTCTGTATCTAACAATAGTGGCCAGGCAGATATGAAGGAAGTTTATGAGCACCCAACATTAGCTTCTCCATTAAACAATGGGTATCACTCCACTTCTCAGAATCAACTTGATGCTGAAAAAAATGAGGAGATAAGAGTTGGTTCAGGACAAAGGGCTGTTGGGGGATCTCTGAGTAGTGGTACTGAGGCTGCTATGGCCCGTGATGCATTTGAAGGAATGATCGAGACGTTGTCAAGGACCAAGGAAAGTATTGGGCGCGCAACACGTCTTGCCTTTGATTGTGCTAAATATGGCATTGCCAATGAGGTTGTTGAACTTCTTATCCGAAAGCTAGAAAGTGAAACTAGTTTTCATCGTAAAGTGGATTTGTTCTTTCTGGTTGATTCCATAACCCAATGCTCACATAATCATAAAGGCATTGCAGGCGCTTCTTACATCCCTGCAGTTCAAGGAGGATTGGCACGTCTTCTTGGTGCTGCTGTTCCCCGTGGAACTAGTTCCCGTGAAAATCGTGAAAATCGTCGCCAATGTCTAAAGGTTTTAAGGTTGTGGCTTGAGAGGAAAATTTTTCCTGGATCGGTTCTTCGCCGTTACATGAATGATATTGGAGTTACAGGTGATGATATGGCTGGTAGATTTTCTTTCCGGCGTCTTTCTCGAGCAGAACGATCTGTGGATGACCCAATTAGAGAAATGGAGGGCATGCTTGTTGATGAGTATGGAAGTAATGCTTCAACAATTCAGCTGGCTGGCTTGTTATCTTCGCATATATTCGTAGAGGACGATGATTTTTCTAATAATGCGTCTCCAGCTGATCCTACTCGCACTCTGGTGGATTCAGAGACTTCTACCGTTACCCCAAGTGACAAGCGACACTGTATTTTGGAAGATGTGGATGGTGAGCTAGAAATGGAGGATGTTTCAGGTCATCCAAAGGATGAAAAGCCTGTATTGTTGAACAGTACCTCTGAAATGGATTTTCAATTTCAGGGCTCAGATAGGAGTTTGGATCCAGCATTGAACGTTTCTGGAGAGGATCATGTTATTCGTGAGGGTTCTCCTCCATTACCACTTGATTCGCCTCCTACTCCCCCACCTTTGCCTTCTTCACCTCCACCACCTCCATTATCTACATCTCTTCCCCCACCTCCGCCACCCTCATTGCTACAACCCCCACCTCCTTTACCACCGCCTTGTCCTACACCATCGTTGATTCCTCAATCATCTGGAACAGCTCAGCCTTCAATTTCTATCCTGCCATCTCAATCATCACACCAGTCATCGCCGCTATCAGGTTATCAGCAGCTTCATAACTCTAATGGCACAAATAGTGGCATCCAAATAGTTCAAATGGCTGGAAATTCTTTTCCTGGAGGTCAAAATAGCTCTGTTGTGAAGAATGAAATATTGCCACAGCCGTCTGCTTGCTTTCCTCCAATGGCAGGTTGCAGTTCTCAGGATTCTTCTGCTTTAAACCCTACAAGGAAGTTGGAATATGGACAGAGCGATATGCATCTAAATTCTCAAATTCCTAAACCTAATCAGGAGTTTCAGATCGATTATTTTCGGCCACCACTTGAAAGACCACCAATGAGCAACATAGGTTTTCAGCATGCGAACGTCAGTATACCTGTTCCTCCTTCAAAGTCAGGATATGGTGTTCCTCAGATGTTCCCCTTTAGACCAGACATTCCTGCACTTAATTGTTGGAGGCCTACCTGA 4638 0.4174 MAPWRRRGANKAKANAHLTLGDLVLAKVKGFPAWPAKISRPEDWEKKPDPKKFFVQFYGTEEIAFVLPADIQEFTNEVKTKTIARLHGKTKCFTQAVREICAEYDELEKQRAGGLTDDTDDARVGSEAPSFDGVVDDVKDVTDAVVSNVEKAKTVMEDVGSNLEHHEQRCGETDCQDEKPSTSGRATDGSSPVLSPVLESKSSIGTELNKHNIKSGLEDKSCRKNEVSDIKDFCKVNDFKHDDNAQSVSTDGNKARKLVTSSRKRSEVAADKEISGFDIAFSKGEKSAGHANLFRSRETMKDGKRGKNAFSVDSEDAPKSDPGINSGNKDKNLLKAKTSLKVKNELQESFVDSEEADRTNSFKKNKTQVQGKNNWGLNETLHATKKLKSIDVKDRKTLNSLSEDMKSASPVFPIDSEEADRKNSFKKNKTQVQGKGNLGTNETLHATEKLKRMDVKDNEPLNSLPEDMKSVSPVLTVDSEEADRKNSFKKSKTQVQGKRNLETNETLHATKKLKRMDVKDNKASNSLSKDMRSSLQVFPVDSEEADRKNSSKKSKTQVQGKGNLGTNETLFATEKLKRMDVKDNKPLNSLPEDMKSASPVSTVIGNKALKKTELKRSSSSLKTEKGLSSRAQTAKVDSNDSVCEVLTGTKHHSQERKALPHSANLSSDQHAEMSSTRLKGDADNLAVKQLQRKRRAVCLGEDDDDESKTPVHGGASKTIRSPSLVSEAVKSNDPLLENADVSQLNKEKPGTPEDSHLKGHLTKLCNVSLPTRHPQKENADEVVAVNSPHSPEQLNRKRFPSNVEKLSSISPVNFPKSLPTTKSNAERHKSSKALPKVSNTTQKKADNGSSKSLISTNTLQSQVITHKKKPTSYVERSKTTPKTSPQSVEVHTATENLKELDVFHVDRLELGTEEKSSLYVGSGTPENANTMKHLIAVAQAKRRLVAQYQCHPFDLHYAQVGTPSPSMAQPFLSVSNNSGQADMKEVYEHPTLASPLNNGYHSTSQNQLDAEKNEEIRVGSGQRAVGGSLSSGTEAAMARDAFEGMIETLSRTKESIGRATRLAFDCAKYGIANEVVELLIRKLESETSFHRKVDLFFLVDSITQCSHNHKGIAGASYIPAVQGGLARLLGAAVPRGTSSRENRENRRQCLKVLRLWLERKIFPGSVLRRYMNDIGVTGDDMAGRFSFRRLSRAERSVDDPIREMEGMLVDEYGSNASTIQLAGLLSSHIFVEDDDFSNNASPADPTRTLVDSETSTVTPSDKRHCILEDVDGELEMEDVSGHPKDEKPVLLNSTSEMDFQFQGSDRSLDPALNVSGEDHVIREGSPPLPLDSPPTPPPLPSSPPPPPLSTSLPPPPPPSLLQPPPPLPPPCPTPSLIPQSSGTAQPSISILPSQSSHQSSPLSGYQQLHNSNGTNSGIQIVQMAGNSFPGGQNSSVVKNEILPQPSACFPPMAGCSSQDSSALNPTRKLEYGQSDMHLNSQIPKPNQEFQIDYFRPPLERPPMSNIGFQHANVSIPVPPSKSGYGVPQMFPFRPDIPALNCWRPT* 1546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 445 463 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 504 526 - -
Mtr1g1196 1545 CDD HDGF_related 18 101 IPR035496 -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 1377 1414 - -
Mtr1g1196 1545 Gene3D - 10 113 - -
Mtr1g1196 1545 ProSiteProfiles CID domain profile. 1034 1178 IPR006569 -
Mtr1g1196 1545 SMART PWWP_4 18 75 IPR000313 -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 290 314 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 650 677 - -
Mtr1g1196 1545 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 1318 1414 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 1239 1261 - -
Mtr1g1196 1545 Pfam CID domain 1041 1168 IPR006569 -
Mtr1g1196 1545 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 542 1491 - -
Mtr1g1196 1545 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1492 1545 - -
Mtr1g1196 1545 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 440 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 555 570 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 399 577 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 1236 1264 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 698 759 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 351 377 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 1327 1376 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 659 673 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 429 444 - -
Mtr1g1196 1545 SMART 558neu5 1041 1175 IPR006569 -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 613 633 - -
Mtr1g1196 1545 Pfam PWWP domain 21 104 IPR000313 -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 810 889 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 160 181 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 182 196 - -
Mtr1g1196 1545 PANTHER PROTEIN HUA2-LIKE 1 542 1491 - -
Mtr1g1196 1545 PANTHER PROTEIN HUA2-LIKE 1 1 440 - -
Mtr1g1196 1545 PANTHER PROTEIN HUA2-LIKE 1 1492 1545 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 160 196 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 363 377 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 288 332 - -
Mtr1g1196 1545 Gene3D - 1035 1176 IPR008942 -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 714 728 - -
Mtr1g1196 1545 MobiDBLite consensus disorder prediction 834 868 - -
Mtr1g1196 1545 SUPERFAMILY Tudor/PWWP/MBT 13 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1196 Mtr-Chr1 14118948 14132130 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1196 1 14118948 14132130 Mtr1g1196 1 14118948 14132130 ECH