Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1195 ATGGAAAGGGAAAAATGGAATGAGAATAATTCAAATGGGTATTTTGAAAATCAAGTTTTGTGTGATTATGATCGAGAATCAGTTACGATGTCTTCATCTTCATCTCCACCCAGACTTGGTTACATTGAACATCATGTATCTAAATTTGATACATTGGTTGGTATTGCAATCAAATATGGTGTTGAGGTTACAGACATCAAAAGGATGAATAGCCTTGTTACTGATCATCAGATGTTTGCACTTAAAACTGTTCAAATTCCATTACCTGGAAGACACCCTCCGTCTCCTTGTTTATCAAATGGTTCCATTACTCCAGGAAATGGTAACTCTACTCACAGTCCACCTGACAATGCGCACCGTGAACTGCTTGAATCATTTCAGTCCACAAAATTGAAGTCTTCTGATCGGAAGGTCTCTCCAGCCATGATCTCACTACAGGGTTATTATGGACTTCCCTCTAATCCATCAGAAAATGGTTCATCATCCAAGAACTCGCCTAATTCTTACCGTCCCTTGAGTCGTCACCGAAAATCCAAAAGTTTGGTCAATGTTATTTTGGAAGAGATTATGGAAAAGGATGATACTGCACCAGGTGCACAACCCTGGGAACTTAGCTCTGTTAAACGGAATGACAAACTTGTCCAGAGGCGTCAGAAATCTGTAGCCGACTTTAGCAGAATACCAGAGTTGATTCTGAGGGAGGATAATAGCAGCAGTGGTGGTCTTCCTTCAAGAACAGGAAAGGGTTTAGCTTTGAGACAGAAAGCAGCTAGCCGAACTCCATTGCCAATTGATTCTGAATCAAGTGGGTTGGTTCCTGTGCCAATGAGTATGGGGGATGATGTTCAAACTGATTGTTCATCTGGTGTGAAGAAATCATCCAGTACATCTTGTTTGCATGATCAGGATAATTGTAGCTCATCCATTTGGCCATCCAAAATGTGGAATTTGAAACCAGATTTACAGGCCCTTTCAACTGCAGCCATTAAAAAACCAATCTTTGATGGCTTACCTAAGCCACTAACTGGTAGAAGGAATAAAGCTGCACTTGATTAA 1056 0.4072 MEREKWNENNSNGYFENQVLCDYDRESVTMSSSSSPPRLGYIEHHVSKFDTLVGIAIKYGVEVTDIKRMNSLVTDHQMFALKTVQIPLPGRHPPSPCLSNGSITPGNGNSTHSPPDNAHRELLESFQSTKLKSSDRKVSPAMISLQGYYGLPSNPSENGSSSKNSPNSYRPLSRHRKSKSLVNVILEEIMEKDDTAPGAQPWELSSVKRNDKLVQRRQKSVADFSRIPELILREDNSSSGGLPSRTGKGLALRQKAASRTPLPIDSESSGLVPVPMSMGDDVQTDCSSGVKKSSSTSCLHDQDNCSSSIWPSKMWNLKPDLQALSTAAIKKPIFDGLPKPLTGRRNKAALD* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1195 351 MobiDBLite consensus disorder prediction 97 116 - -
Mtr1g1195 351 MobiDBLite consensus disorder prediction 149 169 - -
Mtr1g1195 351 SUPERFAMILY LysM domain 42 87 IPR036779 -
Mtr1g1195 351 PANTHER LOC443603 PROTEIN-RELATED 27 351 IPR045030 -
Mtr1g1195 351 ProSiteProfiles LysM domain profile. 42 86 IPR018392 -
Mtr1g1195 351 Pfam LysM domain 44 80 IPR018392 -
Mtr1g1195 351 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 27 351 - -
Mtr1g1195 351 MobiDBLite consensus disorder prediction 91 118 - -
Mtr1g1195 351 MobiDBLite consensus disorder prediction 149 176 - -
Mtr1g1195 351 CDD LysM 50 86 IPR018392 -
Mtr1g1195 351 Gene3D LysM domain 28 93 IPR036779 -
Mtr1g1195 351 SMART LysM_2 43 87 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1195 Mtr-Chr1 14112356 14116695 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1195 1 14112356 14116695 Mtr1g1195 1 14112356 14116695 ECH