Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1193 ATGTCACTAAACAATGTTTTCATTTTCATTCTCCTTTGTTGTTTTTCTCTGATTCATAATGTTGCTTGTGCTGATTATGGAACAGCACTTACAAAAAGTTTGTTGTTTTTTGAGGGACAACGTTCAGGTGTGTTGCCTTCTAACCAGAGAGTAACTTGGAGAGGAGATTCTGCACTTAAAGATGGCCAAGATGCTGGGATTGACCTAGTTGGAGGATATTATGATGCTGGAGACAATTTGAAGCTAGGTTTTCCAATGGCATTTACAACAACAATGCTATCATGGAGCACAATAGAGTTTAAAGACCAACTTGGAAAAAAGAATGAGCTTACAAATGCATTAGCAGCCATAAAATGGGGAACAGACTACTTGATGAAAGCACATCAACAACCAAATGTTTTGTATGGAGAAATTGGTGATCCTGATTCAGATCATCAATGTTGGCAAAGACCAGAGGATATGTCAACACCTAGAAATTCTTATAAGATTGATGAACAACATCCTGGCTCTGATCTTGCTGCTGAAACTGCTGCTGCTTTGGCTGCTGCTTCCATTGCTTTTCAATCTGTGGACAATGATTATGCCTCCAAAATGCTAGTTCATGCGACACAACTGTTTGATTTTGCAAACAATAACCAAGGCTTATACCACAATAGTATCCCACCAGCAGCAAAAACATATTCCAGTAGTGGATATAAGGATGAATTACTATGGGCAGCAGCATGGCTTTACCACGCTACAAACTTGAAAAAATACCTCGATTACCTTGGAGGAGCAGGCGACAATGGAGGTGCTAGAACAATGTTTAGTTGGGATGACAAGTATCTTGGTGCACAGATTCTTGCTGCAAAGCTTGTTTTAGATGGGACAGTGGAGTCTTCAGGTATTTGGACTCAATACAAAGCAAATGCAGAACAATTCATATGTTCATGTGCACAAAAATCAACTCAAAATTTTCAGAAAACACCAGGAGGTTTGTTATGGTTTCAGCCATGGGGTAATAATCAATATGTTTCAACTGCTACATTTGCAATGTCCACTTATTCTCAATATTTATCTACAAAACAAGCTTCCCTTCAATGTAATAGTGGTGTTGTCAGTCCTTCTGATCTCACTTCTCTTGTTCAAGCTCAGGTGGACTACATATTGGGTTCTAATCCAAAACAGATGAGTTACATGGTGGGATATGGATCAAATTATCCACAACAAATTCATCATAGAGGAGCTTCAATTATATCAATCAAGCAAGATAGTTCACCATTAGGATGCAAAGATGGCTTTGAAAAATGGTTCAATAAAAATGCACCAAACCCTAATACATTAGAAGGAGCAATTGTGAGTCCAGATCAAAATGATGATTTTACGGATAATAGAAATGACTACCAATTAGGAGAACCAACTACTGTTTCTGTTGCACCTTTAGTTGGTGTTCTTGCTTATCTAGCTTAA 1449 0.381 MSLNNVFIFILLCCFSLIHNVACADYGTALTKSLLFFEGQRSGVLPSNQRVTWRGDSALKDGQDAGIDLVGGYYDAGDNLKLGFPMAFTTTMLSWSTIEFKDQLGKKNELTNALAAIKWGTDYLMKAHQQPNVLYGEIGDPDSDHQCWQRPEDMSTPRNSYKIDEQHPGSDLAAETAAALAAASIAFQSVDNDYASKMLVHATQLFDFANNNQGLYHNSIPPAAKTYSSSGYKDELLWAAAWLYHATNLKKYLDYLGGAGDNGGARTMFSWDDKYLGAQILAAKLVLDGTVESSGIWTQYKANAEQFICSCAQKSTQNFQKTPGGLLWFQPWGNNQYVSTATFAMSTYSQYLSTKQASLQCNSGVVSPSDLTSLVQAQVDYILGSNPKQMSYMVGYGSNYPQQIHHRGASIISIKQDSSPLGCKDGFEKWFNKNAPNPNTLEGAIVSPDQNDDFTDNRNDYQLGEPTTVSVAPLVGVLAYLA* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1193 482 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 381 407 IPR018221 -
Mtr1g1193 482 Pfam Glycosyl hydrolase family 9 26 478 IPR001701 GO:0004553|GO:0005975
Mtr1g1193 482 PANTHER ENDO-1,4-BETA-GLUCANASE 7 482 - -
Mtr1g1193 482 PANTHER ENDOGLUCANASE 15 7 482 - -
Mtr1g1193 482 SUPERFAMILY Six-hairpin glycosidases 9 481 IPR008928 GO:0005975
Mtr1g1193 482 Gene3D - 23 482 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1193 Mtr-Chr1 14077198 14080429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1193 8 481 Glycoside Hydrolase AT2G44550 61.053 0.0 587
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1193 1 14077198 14080429 Mtr1g1193 1 14077198 14080429 ECH