Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0970 ATGGATAATAATGTTCTTGGTCTTCTAAAACTTCGTATTAAAAGAGGTATTAATCTTGCAATTCGTGATTCTAATTCCAGCGACCCTTATGTTGTTGTCAATATTGGCCATGAACAGAAGTTGAAGACTCGTGTAGTGAAAAACAATTGCAACCCTGAGTGGAATGAAGAATTAACCCTTTCAATAAGGGATGTAAGAGTTCCAATATGTCTGACAGTATTTGACAAAGACACTTTCTTTGTAGACGACAAAATGGGCGATGCAGAGATAGACTTGAAACCATATACTCAATGTGTAAAAATGAAGTTGGATACTCTTCCAAATGGTTGTGCAATCAAGAGGGTTCAAGCAAATAGGACTAACTGCCTTGCTGAAGAGAGCAGTTGCATTTGGAAAAATGGAAAAGTCCTTCAAGAAATGATTCTAAGATTGAGAAATGTTGAGAGTGGAGAATTGGTTGTGGAAATTGAGTGGGTGGATGTTCCAGGTTGCAAAGGTCTATTAGGGGCACAAATGTAA 519 0.3757 MDNNVLGLLKLRIKRGINLAIRDSNSSDPYVVVNIGHEQKLKTRVVKNNCNPEWNEELTLSIRDVRVPICLTVFDKDTFFVDDKMGDAEIDLKPYTQCVKMKLDTLPNGCAIKRVQANRTNCLAEESSCIWKNGKVLQEMILRLRNVESGELVVEIEWVDVPGCKGLLGAQM* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0970 172 Gene3D C2 domain 3 164 IPR035892 -
Mtr1g0970 172 SMART C2_3c 8 104 IPR000008 -
Mtr1g0970 172 Pfam C2 domain 8 94 IPR000008 -
Mtr1g0970 172 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 165 IPR044562 -
Mtr1g0970 172 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Mtr1g0970 172 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 93 IPR035892 -
Mtr1g0970 172 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 4 165 - -
Mtr1g0970 172 CDD C2_ArfGAP 6 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0970 Mtr-Chr1 11166986 11169308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0970 40 167 C2H2 Transcription Factor Family AT1G70790 68.462 3.45e-61 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0970 1 11166986 11169308 Mtr1g0970 1 11166986 11169308 ECH
Mtr1g0970 1 11166986 11169308 Mtr6g1812 6 33009083 33011669 ECH