Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0967 ATGCACCCATACAACCGTCTTCCATCATCATCCAACACCAACACCCCCTCACCACCACCCTCCCCACTCCGCTCCCCTCGTCTCCGCCACACCCGCTCCAAAACCGCTCCTAAACCCTCTCCCCGAACCATCCCCCAACGACTCTCTTACCTCTTCCTCTCCGGTCTCCTCCGCCGTCAAGGCATCTTTCTCTTCGCTCCTCTCCTCTACATCTCCTGTGTGCTTCTCTACTTCAGTTCGTTCTCCTTCGACGTTGTTCCGTTCATTAATCACCGTTCCGCTCCTGGCTCTGTTTATCGTAGTCCTCAACTCTACGCTAAACTGAAATTCGAAATGGATGAAGATAATTCTTCAGTTGACGCGATATCAACAATATGGAAGAGTCCATATAAAGGTCGTGAATGGAAACCATGCGTTCACACATCTTCAGAAGGCCTTCCTGAATCAAATGGATACATTTATGTAGAGGCCAATGGTGGCTTAAATCAGCAAAGGATATCGATATGCAATGCTGTTGCGGTGGCTGGCTATCTTAATGCTACTCTCGTGATCCCTAATTTTCATTATCATAGCATATGGAAAGATCCTAGCAAGTTCAGCGACATTTACGATGAAGAATATTTTGTCAATACCTTGAAAAATGATGTACAGATGGTTGAAAAGATACCTGAGCACCTGATGGAAAGATTTGGCAGCAACATGACAAATGTTTTCAATTTCAGGATCAAGGCAATGTCATCCATTCAGTATTACAGAGATGTGGTACTCCCAAAGTTATTTGAAGAACAGGTTATAAGGATCTCACCTTTTGCAAATAGATTGTCATATGATGCTCCTCCTGCTGTCCAGCGTCTCAGATGCTTAGCAAATTACGAGGCTTTACGATTTTCAAGTCCCATATTGACCCTGGCTGAATCTTTGATTGCAAGAATGAGGAAGCAAAGCATAAAGAATGGTGGTAAATATGTCTCCATTCATCTTCGTTTTGAAGAGGATATGGTTGCTTTCTCTTGTTGTGTTTTTGATGGTGGGAAAGAGGAGAGAGATGACATGATTGCAGCAAGAGAAAGAGGTTGGAAAGGGAAATTTACAAAACGTGGACGAGTTATACGTCCAGGAGCAATCAGGATCGATGGGAAGTGTCCCCTTACTCCATTAGAGGTTGGCCTTATGCTTAGGGGAATGGGTTTTACAAAGAACACCTCCATCTATTTGGCATCTGGAAAAATATATAATGGCGAGAAAACAATGGCCCCTCTAAGGGAAATGTTTCCTAATTTACATACCAAGGAGACTTTAGCATCTGAGGAGGAACTTGCCCCATTTAAGAATTATTCTTCCAGGATGGCTGCCATAGACTATACTGTTTGTCTTCATAGCGAGGTGTTTGTCACAACTCAGGGTGGTAACTTCCCTCATTTTCTACTGGGCCACCGGAGATACTTGTATGGTGGACACTCTAAGACAATCAAGCCTGATAAGCGGAAGTTGGCATTACTCTTCGATAGTACCAACATTGGATGGAAAAGTCTTAAGCACCAATTGCTGAGCATGAGGTCACACAGTGATTCCAAGGGTGTTGAGCTCAAAAGGCCTAATGACTCCACATATAGCTTTCCATGTCCAGATTGCATGTGCCATGCAAATTGA 1650 0.4388 MHPYNRLPSSSNTNTPSPPPSPLRSPRLRHTRSKTAPKPSPRTIPQRLSYLFLSGLLRRQGIFLFAPLLYISCVLLYFSSFSFDVVPFINHRSAPGSVYRSPQLYAKLKFEMDEDNSSVDAISTIWKSPYKGREWKPCVHTSSEGLPESNGYIYVEANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWKDPSKFSDIYDEEYFVNTLKNDVQMVEKIPEHLMERFGSNMTNVFNFRIKAMSSIQYYRDVVLPKLFEEQVIRISPFANRLSYDAPPAVQRLRCLANYEALRFSSPILTLAESLIARMRKQSIKNGGKYVSIHLRFEEDMVAFSCCVFDGGKEERDDMIAARERGWKGKFTKRGRVIRPGAIRIDGKCPLTPLEVGLMLRGMGFTKNTSIYLASGKIYNGEKTMAPLREMFPNLHTKETLASEEELAPFKNYSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLLGHRRYLYGGHSKTIKPDKRKLALLFDSTNIGWKSLKHQLLSMRSHSDSKGVELKRPNDSTYSFPCPDCMCHAN* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0967 549 PANTHER PROTEIN ESMERALDA 1 1 549 - -
Mtr1g0967 549 Pfam GDP-fucose protein O-fucosyltransferase 152 482 IPR019378 -
Mtr1g0967 549 PIRSF UCP009360 25 549 IPR024709 -
Mtr1g0967 549 MobiDBLite consensus disorder prediction 1 42 - -
Mtr1g0967 549 CDD O-FucT_plant 152 489 IPR024709 -
Mtr1g0967 549 PANTHER - 1 549 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0967 Mtr-Chr1 11139915 11148208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0967 117 549 Miscellaneous Gene Families AT1G22460 38.106 3.70e-96 301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0967 1 11139915 11148208 Mtr1g0967 1 11139915 11148208 ECH