Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0950 ATGAAAAAAAATCCTTTTACATTTTCCCACTTTGTAGCTTCGAATAACAAGAACCACACTCTCTTCGTCTCTCACAGTCCGATCGTCACCGCCACCTTCCACCGCCACGTCCGACACCCATCTCTCCGCCGTCGCACTTCCAACGCCAACAACATTACAATGTGTATGAGTTGCAAGCAACTAAGAACTGTTATACTCTTTCAAGGGAAGACTGGTTATTCAAACCCTTTCAGCACTAAAATGAGGTGTTGTAATTTTCTCCCTTTTAAGTTTTCGAAAATGTGTTACCGGATGAAGCATAAATTTACAGACCAGAAGGTTGTTGAAATAGACCAGCACGGCGTAAAGAGCACTGTAAAGTTGCGTAAGAAGGTATTTGCTCTTATGGATCATAACATCCCTGATCTAATTGGAAATGGAAGCGGTGAAATGAAATCTAAAATGAATCGGAAAGATGCAGTAGATGATTTCGACATCTCCTTGATGTGTAGGATATTTCCATCAATTACTTTGGGTAGTGCTCCTCAAGTGGGTTTGTATGATGGGACCACAGCATATTCTGAAACAAATATCATTTCGGGAACCAAAGATTTCGAACAACATTTATACGATTCTAGTTTAACATCTTCACCATTACGAAAAGATGATTCTTTTCCTTGTCCTTTAACACCTCAATCAGTGTCTTCAATATATGAGGAAAAATTGGATCAAGTTACTAGGGAAGATTCGCAAAAGAAAGTGGGGCTGCAGTCACAGTCAAACCTTACACTTAATGAGTTATCTCTCGACACATCTGTCAATTGCTTACCTGGATTAACTAAGAAGCAACGTGAGCAACTAGATAACTGTGGGTTTCACACGTTACGGAAATTGCTGCACCATTTTCCACGATCATATGCTAATCTACAGAATGCACATGGGAACATTTATGATGGGCAATATTTGATGTTTGTTGGAGAAGTCTTATCTTCAAGGGGAGTCAGAGCTAATTGTTCAATTTCATTACTTGAGGTGATTGTTGGTTGTCAGATTGCAGACAAGGAATCGGATATTGAGCATGTAACCGACAAAGTTGGGAAAACAAGGACAGTTTATTTGCATTTGAAGAGATTTTTCCGTGGCACACGTTTTACTTTTAAAGGTTTCCTAAATAGTATTGCGAACAAGTATCAAGTGAGAGACATAGCATGTGTGAGTGGCAAGGTTAAGACTATGCCTGCTAAAGATCACTACGAGATTAGAGAATTTAATATTGATGTGCTTGAAGATGGGAAAGATTTATCCCTTTGCGCAAAAGAGAGGCCATATTGTATCTACCCTTCAAAAGGGGGTTTGAACCCAACATTTCTTCGGGACATCATTGCAAGAGCTTTACATGCCTTGCCAGTCATTGTTGATCCAATTCCTAAAGACATTAGAGAGGAATTTGGACTCTTAAGTCTTCATGATGCATATTTTGGAATTCACAAACCAAAGGATATTAGTGAAGCTGATCTGGCCCGCAAGAGACTTATATTTGATGAATTTTTTTACCTGCAGTTAGGACAATTATTCCAAATGCTCGAAGGTCTTGGTACACAAGTAGAAAAGATTGGGTTGCTAGATAAGTATAGAAGACCAGAAAATAACACGGTGTGTACAAAGGAATGGTCCTGTCTCACCAAGAAGGTTTTGGAGCTCCTTCCCTATACTCTTACTTCCGGTCAACTGCAAGCTGTTTCAGAAATTATTTGGGATTTAAAAAGGCCGGTTCCAATGAATCGGCTACTTCAGGGTGATGTTGGATGTGGGAAAACTATTGTTGCTTTTCTTGCATGCATGGAAGTTATTGGCTCTGGCTACCAGGCGGCTTTCATGGTTCCATCTGAGTTGGTTGCAATCCAGCATTATGAACACTTGCTTGCGTTGCTTGAAAACTTGGACGAGGTCAAGTTCAAGCCAACTGTTGCTTTACTCACTGGTTCAATCCCAATAAAACAATCGCGGCTTATTCGCAAGGGTATCCAGACCGGAGAAATTTCAATCGTCATTGGAACCCACAGTTTGTTTGCAGATAGCGTTGAATTCTCAGCCTTACGTATTGCTGTGGTGGATGAGCAGCATCGCTTTGGTGTGATTCAAAGAGGAAGATTTAACAGTAAGTTATTTTATAAATCTTCAATTTCGAGTCTGGAGGATGCTATTACAGACAAGTCCTCAAAGACTGATGATTATATGGCTCCACATGTTCTTGCCATGTCTGCTACTCCCATCCCAAGGACCCTTGCGCTTGCTTTATATGGTGATATGTCACTGACACAGATAACCGACTTACCACAAGGAAGGATTCCTGTTCAAACATATGCCATTGAGGGAAGTGACAAAGGATTTGAGGATGCCTACAAGATGATGATGGATGAGTTGGAAGATGGGGGGAAAATTTATCTTGTCTACCCAATTATCGAACTTTCGGAGCAGTTACCTCAGCTTCGTGCTGCTTCTGCAGATCTCAAAGTTATCTCAGACCGGTTTCCAGGATACAATTGTGGTTTATTACATGGGAGAATGAGAAGTGAAGAAAAAGAAGAAACGTTAGGGAAGTTTAGGACTGGAGAATTGAATATACTACTTGCCACTCAAGTAATTGAAGTTGGTGTTGATGTTCCAGATGCATCGATGATGGTTGTGATGAATTCTGAGAGGTTTGGAATGGCCCAATTACACCAACTCAGGGGCCGAGTTGGACGCGGAACAAGGCAGTCAAAATGTATATTAATATCATCAACTGCCAGTGGCCTTAATCGTTTGAAAGTACTGGAGCAATCATCAGATGGGTTTCATCTTGCTAATATGGACCTATTATTACGTGGACCTGGTGACTTGCTTGGCAAGAAACAATCTGGACATCTTCCCGAGTTTCCTATTACCAGATTGGAAGTCGACGGCAATATTTTACAAGACGCACATGTTGCTGCACTGAAAATCTTAAGTGCTTCCCATGATCTGGAGCAATTTCCTGCACTTAAACTGGAGCTTGGCATGAGACAGCCACTTTGCCTGCTAGGTGATTGA 3051 0.41 MKKNPFTFSHFVASNNKNHTLFVSHSPIVTATFHRHVRHPSLRRRTSNANNITMCMSCKQLRTVILFQGKTGYSNPFSTKMRCCNFLPFKFSKMCYRMKHKFTDQKVVEIDQHGVKSTVKLRKKVFALMDHNIPDLIGNGSGEMKSKMNRKDAVDDFDISLMCRIFPSITLGSAPQVGLYDGTTAYSETNIISGTKDFEQHLYDSSLTSSPLRKDDSFPCPLTPQSVSSIYEEKLDQVTREDSQKKVGLQSQSNLTLNELSLDTSVNCLPGLTKKQREQLDNCGFHTLRKLLHHFPRSYANLQNAHGNIYDGQYLMFVGEVLSSRGVRANCSISLLEVIVGCQIADKESDIEHVTDKVGKTRTVYLHLKRFFRGTRFTFKGFLNSIANKYQVRDIACVSGKVKTMPAKDHYEIREFNIDVLEDGKDLSLCAKERPYCIYPSKGGLNPTFLRDIIARALHALPVIVDPIPKDIREEFGLLSLHDAYFGIHKPKDISEADLARKRLIFDEFFYLQLGQLFQMLEGLGTQVEKIGLLDKYRRPENNTVCTKEWSCLTKKVLELLPYTLTSGQLQAVSEIIWDLKRPVPMNRLLQGDVGCGKTIVAFLACMEVIGSGYQAAFMVPSELVAIQHYEHLLALLENLDEVKFKPTVALLTGSIPIKQSRLIRKGIQTGEISIVIGTHSLFADSVEFSALRIAVVDEQHRFGVIQRGRFNSKLFYKSSISSLEDAITDKSSKTDDYMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPQGRIPVQTYAIEGSDKGFEDAYKMMMDELEDGGKIYLVYPIIELSEQLPQLRAASADLKVISDRFPGYNCGLLHGRMRSEEKEETLGKFRTGELNILLATQVIEVGVDVPDASMMVVMNSERFGMAQLHQLRGRVGRGTRQSKCILISSTASGLNRLKVLEQSSDGFHLANMDLLLRGPGDLLGKKQSGHLPEFPITRLEVDGNILQDAHVAALKILSASHDLEQFPALKLELGMRQPLCLLGD* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0950 1016 SUPERFAMILY Nucleic acid-binding proteins 260 462 IPR012340 -
Mtr1g0950 1016 CDD DEXHc_RecG 504 772 - -
Mtr1g0950 1016 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 777 965 IPR027417 -
Mtr1g0950 1016 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 466 772 IPR027417 -
Mtr1g0950 1016 Pfam Helicase conserved C-terminal domain 798 910 IPR001650 -
Mtr1g0950 1016 Pfam ATP-dependent DNA helicase RecG, domain 3, C-terminal 936 994 IPR045562 -
Mtr1g0950 1016 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 579 768 IPR014001 -
Mtr1g0950 1016 SMART helicmild6 814 911 IPR001650 -
Mtr1g0950 1016 Gene3D - 522 769 IPR027417 -
Mtr1g0950 1016 PANTHER ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTIC 54 1016 - -
Mtr1g0950 1016 Gene3D - 778 949 IPR027417 -
Mtr1g0950 1016 Pfam DEAD/DEAH box helicase 586 753 IPR011545 GO:0003676|GO:0005524
Mtr1g0950 1016 SMART ultradead3 561 779 IPR014001 -
Mtr1g0950 1016 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 789 947 IPR001650 -
Mtr1g0950 1016 TIGRFAM recG: ATP-dependent DNA helicase RecG 283 984 IPR004609 GO:0003678|GO:0006281|GO:0006310
Mtr1g0950 1016 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 54 1016 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0950 Mtr-Chr1 10960754 10978845 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0950 1 10960754 10978845 Mtr1g0950 1 10960754 10978845 ECH