Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0948 ATGATAACACTAAAAGATCTTTACACTGTCTTAACAGCAGTGGTTCCATTATATGTTGCTATGATCTTAGCCTACGGTTCGGTCCGTTGGTGGAAGATTTTCTCACCGGATCAATGTTCCGGTATAAACCGTTTTGTCGCGGTTTTCGCCGTACCTCTCCTTTCCTTCCACTTCATCTCAACCAATAATCCATACCAAATGAACTTCAGGTTCATAGCTGCAGACACACTTCAAAAAATCATCATGCTAGTAGCACTTTCATTATGGACATTGTTCACTAAAAATGGCAATTTAGAATGGATGATAACAATCTTTTCATTATCAACACTTCCTAACACTTTGGTTATGGGAATTCCTTTGTTAATTGCTATGTATGGTGATTATTCAGGTAGCTTAATGGTTCAAGTTGTGGTTCTTCAGTGTATTATTTGGTACACTCTTTTGCTTTTTCTTTTTGAGTACCGTGGTGCTAAGCTTTTAATCATGGAGCAGTTTCCAGAAACCGCGGCTTCCATCGTTTCCTTTAAGGTCGATTCGGACGTTATGTCGTTAGATGGAAGAGATTTTCTTGAAACTGATGCATCAGTTGGTGATGATGGGAAGTTACATGTTACTGTTAGGAAGTCTAACGCGTCGCGGAGGTCATTTATGATGAATACTCCGCGACCGTCAAATTTGACTGGAGCTGAGATTTATAGTCTCAGCTCCACACCTAGAGGATCCAATTTCAACCATCAGGAGTTTTACTCCATGATGGGTTATCAACCAAGACATTCCAATTTTGGGGCTAATGATTTGTATTCTGTTCAGTCTTCTTCTAGAGGACCAACTCCTAGACCTTCAAATTTCGAAGAAAACGGTGCAAGTTCTCCTAGATTCGGGTTTTATCCGGCTGCGCAAACCGTGCCTACTTCGTATCCGGTGCCGAACCCGGAATTCTCCTCTACTACTAAACCTGTGAAGAATCAGAATCAAAATTTGATGCCGCAACAACCGCAGGTTCAATTGCAGACAAAAGGTTCTCAGGATAAAGAGTTGCATATGTTTGTGTGGAGCTCAAGTGCTTCGCCGGTTTCGGAAAGTGCTGGCCTCAACGTGTTCCGAAATTCGGAACAATCGGAAGAGGGTGCTAAGGAGATCAGGATGGTGGTGGCTGATGAACATAATCAAAATGGTGAAACCAATAACAAAGGTGGTCAAGAAAAGGAAATAGGTGGGGAAGAGGACTTCAAGTTCAATGGGGTGAAGGTAGGAGAACAAGGAGAAGGACCCAATGGGCCTAACAAGCTCGGGTCGAATTCAACGCCGGAGCTCCACCCTAAAGCCACTGGAGTCGCGGATTCAAGTGTCGGAAAACTCATGCCTCCGGCGAGCGTCATGACACGTCTCATACTCATTATGGTTTGGAGGAAGCTTATCCGTAATCCAAACACTTATTCAAGTCTCATTGGTCTTATTTGGTCCCTTGTTGCCTTTAGGTGGGATGTTCATATGCCTAAAATAATAGAGAAATCAATTTCCATACTGTCTGATGCTGGTCTTGGAATGGCTATGTTTAGCTTAGGTCTGTTTATGGCTCTTCAACCCAAGATCATTGCATGTGGGAATTCTGTTGCTTCATTTGCCATGGCTATAAGATTCCTTACTGGTCCAGCAGTTATGGCAGCAGCTTCTATCGCCGTTGGCCTCCGTGGGACCCTCCTACATGTAGCTATTGTTCAGGCTGCACTTCCACAAGGGATTGTTCCATTTGTGTTTGCAAAAGAGTACAATGTTCATCCAGCCATTCTTAGTACAGCGGTTATATTTGGTATGTTAATAGCCCTTCCAATTACTCTACTCTACTACATTCTCCTTGGTTTGTAA 1866 0.4298 MITLKDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAVFAVPLLSFHFISTNNPYQMNFRFIAADTLQKIIMLVALSLWTLFTKNGNLEWMITIFSLSTLPNTLVMGIPLLIAMYGDYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVMSLDGRDFLETDASVGDDGKLHVTVRKSNASRRSFMMNTPRPSNLTGAEIYSLSSTPRGSNFNHQEFYSMMGYQPRHSNFGANDLYSVQSSSRGPTPRPSNFEENGASSPRFGFYPAAQTVPTSYPVPNPEFSSTTKPVKNQNQNLMPQQPQVQLQTKGSQDKELHMFVWSSSASPVSESAGLNVFRNSEQSEEGAKEIRMVVADEHNQNGETNNKGGQEKEIGGEEDFKFNGVKVGEQGEGPNGPNKLGSNSTPELHPKATGVADSSVGKLMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVAFRWDVHMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVASFAMAIRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYILLGL* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0948 621 MobiDBLite consensus disorder prediction 400 415 - -
Mtr1g0948 621 PANTHER AUXIN EFFLUX CARRIER-RELATED 1 621 - -
Mtr1g0948 621 Pfam Membrane transport protein 9 616 IPR004776 GO:0016021|GO:0055085
Mtr1g0948 621 MobiDBLite consensus disorder prediction 263 291 - -
Mtr1g0948 621 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 621 - -
Mtr1g0948 621 TIGRFAM 2a69: auxin efflux carrier 1 621 IPR014024 -
Mtr1g0948 621 MobiDBLite consensus disorder prediction 263 288 - -
Mtr1g0948 621 MobiDBLite consensus disorder prediction 387 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0948 Mtr-Chr1 10936234 10941488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0948 1 621 Organic Solute Cotransporters AT1G70940 74.923 0.0 907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0948 1 10936234 10941488 Mtr1g0948 1 10936234 10941488 ECH