Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0938 ATGGTTCTTACCTACAAACAAGGTTACTTGTCACCTCAACCATTTCTCATCAGAGACATAACATCTAGGTTTCCACCTCCACTAAGCTTCTCGCTTAAACTTCAAGGCCAACCAAAACTCAGGAGCATTGTTAAAATGTCAGCGACTGAAGTCACAAATCCGACAATCTCATACGAGTCCTTCGCAGTAAAGCCTCCTTTGCATCCTACTTATGATTTGAAGGGCATTATAAAGTTGGCACTTGCAGAAGATGCTGGGGATCTAGGTGATATAACATGCTTGGCCACCATTCCATTTGACATGGAAGTGGAAGCTTATTTCTTGGCGAAGGAGGATGGCATCGTTGCTGGAATTGCACTTGCAGAGATGATATTTAATGAAGTTGATCCTTCTTTAAAGGTGGAGTGGTCTAAAAAAGATGGAGATTTTGTCCATAAAGGACTACAGTTTGGAAAAGTTCATGGACGAGCACATAACATTGTTGTAGCGGAAAGGGTGGTGCTAAACTTTATGCAGAGGATGAGTGGCATTGCAACTTTAACCAAGGCAATGGCAAATGCAGCATCCCCTGCTTATATACTGGAGACTAGAAAAACTGCTCCGTGTTTACGTTTGTTGGATAAGTGGGCGGTATTAATTGGTGGAGGACGTAATCATAGAATGGGTTTGTTTGACATGGTTATGATAAAAGATAATCATATATCAACAGCTGGAGGTGTTACAAATGCCCTAAAAGCTGTCGACCTGTATCTGGAGAAAAATAGCCTTCAATTGGAGGTTGAGGTTGAGACTAGGACTCTTGAGGAAGTGGAAGAAGTACTACAGTATGCATCTCAAACAAAGACTTCTTTAACTCGAATAATGTTGGATAATATGGTTGTACCTTTATCAAACGGAGATGTTGACATATCTATGCTGAAAGAAGCTGTGCGGTTGGTCAATGGGAGATTTGAAACTGAGGCTTCAGGCAATGTTACTATCGATACAGTACATAAAATCGGGCAAAGTGGAGTGACCTACATTTCTAGTGGTTCCTTGACTCATTCAGTGAAAGCACTTGATATCTCCCTCAAAATTGATACTGAATTGGCGCTTAAAGTTGGAAGGCGCACCGGAAGAGCTTGA 1125 0.4142 MVLTYKQGYLSPQPFLIRDITSRFPPPLSFSLKLQGQPKLRSIVKMSATEVTNPTISYESFAVKPPLHPTYDLKGIIKLALAEDAGDLGDITCLATIPFDMEVEAYFLAKEDGIVAGIALAEMIFNEVDPSLKVEWSKKDGDFVHKGLQFGKVHGRAHNIVVAERVVLNFMQRMSGIATLTKAMANAASPAYILETRKTAPCLRLLDKWAVLIGGGRNHRMGLFDMVMIKDNHISTAGGVTNALKAVDLYLEKNSLQLEVEVETRTLEEVEEVLQYASQTKTSLTRIMLDNMVVPLSNGDVDISMLKEAVRLVNGRFETEASGNVTIDTVHKIGQSGVTYISSGSLTHSVKALDISLKIDTELALKVGRRTGRA* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0938 374 TIGRFAM nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 77 359 IPR004393 GO:0004514|GO:0009435
Mtr1g0938 374 PANTHER NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING] 58 367 IPR027277 -
Mtr1g0938 374 SUPERFAMILY Nicotinate/Quinolinate PRTase C-terminal domain-like 177 359 IPR036068 GO:0009435
Mtr1g0938 374 SUPERFAMILY Nicotinate/Quinolinate PRTase N-terminal domain-like 66 176 - -
Mtr1g0938 374 PANTHER NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING] 58 367 - -
Mtr1g0938 374 CDD QPRTase 76 358 IPR004393 GO:0004514|GO:0009435
Mtr1g0938 374 Coils Coil 253 273 - -
Mtr1g0938 374 Pfam Quinolinate phosphoribosyl transferase, C-terminal domain 177 358 IPR002638 GO:0004514|GO:0009435
Mtr1g0938 374 Gene3D Aldolase class I 189 349 IPR013785 -
Mtr1g0938 374 Pfam Quinolinate phosphoribosyl transferase, N-terminal domain 88 175 IPR022412 GO:0016763
Mtr1g0938 374 Gene3D - 80 357 IPR037128 GO:0016763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0938 1 10822368 10828063 Mtr1g0938 1 10822368 10828063 ECH