Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0768 ATGTATTCCTCTTCCTCCGCCGAGAAAAAACCTAACCCTAAAAATGTATACCACATCGGAGGTCTTCCCGTCGAATTTCCATACCAACCCTACGGTTCTCAATTCGCGTTTATGGGTCGAGTTATCTCAACCCTTAATCGAGCTCAGAATGAAGGTCACTCTCACGCGTTACTGGAGTCCCCCACCGGTTCCGGTAAATCCCTTTCTCTTCTCTGCTCCTCTCTCGCTTGGCAGCAACACTATAAACCCACCCCTCCGCAAACCGCCGCCGATCCTCTCGCTAACGGTGGTGGATTTCTTCTCGACGAGGTTCTACTTCCTTTAGAACCTACCAATAAGAAGCTCAAGAAAAAGACAGTTCCAACTATTTATTATGCCTCGAGAACACACTCACAAATTACTCAATTGGTTCGTGAATTGCGCAAAACTTCATACAGGGTGCCCATGGCTTTACTGGCATCACGGAAGCATTACTGCACCAATAAAAATATACGTGGCAGAGAGAACATAGACGAAGAATGCAAACAACTTTTGAAAGATAAAGTAATAGGATGTCCAGAGTTCAAAAGTGTACAGAAAGTCAAAGCTCACCCTTCCCTTCAGAAAGGAGGATGCAATGAGGTGCATGACATAGAAGATCTCGTTAAAGTTGGACAATCGGTGAAAGGTTGCTCTTATTATGCTGCCCGTTCTATGTCAAATGATGCACAATTAGTATTTTGTCCATATAACTACATCATTAATCCAGTCATTCGGGGAGCAATGGAGGTGGATATTCAAGGAGCCATCGTGATATTCGATGAAGCTCACAATATAGAGGACATTAGTCGTGATGCTGGTAGTGTGGATATTGAAGAGGATACATTGGACAAACTACAAATGGAGCTCGAGCAACTCTGTCATTCAGATATTGCAATTTACCTACCCCTGTATGAAATGACACAGGGCCTTACTAGCTGGATGGAACACAAGAAAACTACTCTGGAAAAACGTGACTTTCAGCACTATGTGTCATGTTGGACTGGTGATAAAGCTTTACAAGAGCTTGAAGAAGCAAATATTTCAAAGCAGTGCTTCCCTATCTTGCTAGAATGTGCTACTAAGGCAATCAAAGTTTATACTGACTTGGAAGAAGATGAACCACATTTAAGTGGCATGTCAGTGATAACATTGGAAGGCTTATTCTCATCACTATCTTATTTCTTCTCAAAAAATGGATCTCATATGTTGGATTACCAGCTTGCTCTTCAGCGAACTGTTAGAAAACATGATAGAAGAGCTTCTGGGAACTGGACACACACTTTAAGTCTGTGGTGCTTGAATCCAGCTGCTGTATTTAGAGAGGTTGCCGATCTTTCGTTATCAGTCATATTGACTTCTGGGACACTGTCACCAATGATGTCGTTTTCTTCTGAACTTGGAGTTAAGTTTGAAACTAATCTTGAAGCTCCACATGTGATTGATACTGATTCACAGGTGTGGCCTGCTATAATCTCCACTGGTCCTGGTAATTATCCTTTGAATGCAAGTTACAAAACTGCTGATGTATATGCATTCCAGGATGCAGTTGGAAGATCTTTAGAGGAAATCTTCAAGATTGTTTCAGGTCAATGGTCTCGACTCAAGGCAGAAAAGCCCCTTTTTGTTGAATCAAAGGGGGGAAGCCAAGATGATTTTGAACTTACATTGAAGGGTTATTATGACTCAATTCATCATGACAAAAAACCTGCTTCTGGAAGGAAAAGAAGGATTAAGAAAACTGATCTAAATCACTTCCATGCAGTTGATTCCATACAGGATACTAAGAAAGGAGGAGCAGCTTTACTTGGTGTTTGTCGAGGAAAGGTTTCTGAAGGAATTGATTTCTCTGATGATAATGCCAGAGCAGTTATCATTGTTGGTATCCCATTTCCAAACATGTATGATATTCAAGTTGCACTAAAGAAGAAGTATAACGACACATTCAAATCATCTAAACAACTGTTAGGAGGAAATGAGTGGTACTGCCACCAAGCATTCCGAGCTTTAAATCAAGCAGCAGGGCGGTGTATACGACATAGACTTGATTATGGAGCAATCATCCTATTGGATGAACGCTTTCGTGAAGAAAGGAATAAAGCATTTATTTCGAAGTGGTTAAGAAAACCCTTGAGAGTGTATGACAGTTTTGAATTGTCACTGGAGAAACTAAAATCATTCTTTGAGAATGCCAAGGAGCGGTATGGCTTGGATACAGTGCATGCAACAACGAATTTGAACTTAAATGACGATGATGGTGTTCAAAACAAGGATGGAAATATGTGGTTTCCAAAGAAGAAAAATCAGAAACTGAACAAGTCTAGAAATGGAGCTGAGAAAGAGACGTCGGTTATTGAGGATAAAATCTCTATTCCCACACCGAGTCTGAGCTCTCACAATCTTGGCGAAAGTCAGCCATCAGCTCCAAGGAATAGTAACACATACAGTTTCAAAGACCATATTAACCTCCAATGTTGTAATCTGACGGAAAGGTTCACTGAGGCATCATCTGTGACATTTACACATGATGAAACCCCCACCGTCAAGGAAAGCCCATCTTCACATATTGCCAGTGGTGCTGGCAGCGCATATTACTCTAAGGATGACAATTCTGATTGCACCATAATTGAGGATCACTCGTCAAGTTTTCCAGTGTCTTCAACTACTGGAAGTAAAATATCAAACACAGTCACTCCCGAAAAGAGTGTAACTGCAAATAATATTCCAGAATCATCTTTGAATTCGAGTGTTAATTCTCACAATCAGAAAAGGAGAAAGCCCACGGTCGTACCATATATAGACCTCATTGAAGAAGAAAACCATGAAGCATCTTCTGTCAGCACTCCGAAATGGTACACAAAAAGCTCAGTGGAAGTTAGAGAGGCAACCCATGAAACTGAATGTAGTTTGGGAAGAATTTCAAACTTGCAATCTCCTCAGTTACCAACAAGCAATTTACCTGGTTCATGTTCATTAACCATCCCTCTACTAGACAAAAGGTTACTGCTATTTTGTTCACTCTGCAAAAACCCATTGGGACGACATGAGAACCATCTATCTCTTACATGCTCTTTGATTTCATCATCAATTGTTCACTTGAGATTCCTTTTGAAAAAAAGACTTGCAACATACACCGCTGATGCAGAAAAGAGTGTACCAGTTATTGTTACTGATTCTTCATTTGTTGATCAACGTGTTTGCAATAGAGTACCTAAAAGTACACAGGAAGAAGGTATATGGTGTCCAGAAGATGGGTGTGTTTTCAGCACAATTTTTTGTCCCTTCTGCAGTAATACCAACAATTTGCTCGGAGTTCAGATCATGGCAACCAATTCTTCAAATGCTAAGTTACTTGACAAGATATTGTTTTTCTTTGATTCTTTGGAAGTGAAATACCAAGAAGAAGCAGGAAAAAGTGCTTCAGAGGAAGTGGATTTTTCACCAATTACCGACTCTGGCATGGATGGAGTTGCAGCCTTAAATTCCTTTGAGAAATATTCTTATGTTCCCCAACCAGGGAAATCAGAAGTCTGGAAGTCTAGAAAATCAAAGCCAAAACTAAGAGGGTCGCCTTATGCAGAATGTTGA 3606 0.4054 MYSSSSAEKKPNPKNVYHIGGLPVEFPYQPYGSQFAFMGRVISTLNRAQNEGHSHALLESPTGSGKSLSLLCSSLAWQQHYKPTPPQTAADPLANGGGFLLDEVLLPLEPTNKKLKKKTVPTIYYASRTHSQITQLVRELRKTSYRVPMALLASRKHYCTNKNIRGRENIDEECKQLLKDKVIGCPEFKSVQKVKAHPSLQKGGCNEVHDIEDLVKVGQSVKGCSYYAARSMSNDAQLVFCPYNYIINPVIRGAMEVDIQGAIVIFDEAHNIEDISRDAGSVDIEEDTLDKLQMELEQLCHSDIAIYLPLYEMTQGLTSWMEHKKTTLEKRDFQHYVSCWTGDKALQELEEANISKQCFPILLECATKAIKVYTDLEEDEPHLSGMSVITLEGLFSSLSYFFSKNGSHMLDYQLALQRTVRKHDRRASGNWTHTLSLWCLNPAAVFREVADLSLSVILTSGTLSPMMSFSSELGVKFETNLEAPHVIDTDSQVWPAIISTGPGNYPLNASYKTADVYAFQDAVGRSLEEIFKIVSGQWSRLKAEKPLFVESKGGSQDDFELTLKGYYDSIHHDKKPASGRKRRIKKTDLNHFHAVDSIQDTKKGGAALLGVCRGKVSEGIDFSDDNARAVIIVGIPFPNMYDIQVALKKKYNDTFKSSKQLLGGNEWYCHQAFRALNQAAGRCIRHRLDYGAIILLDERFREERNKAFISKWLRKPLRVYDSFELSLEKLKSFFENAKERYGLDTVHATTNLNLNDDDGVQNKDGNMWFPKKKNQKLNKSRNGAEKETSVIEDKISIPTPSLSSHNLGESQPSAPRNSNTYSFKDHINLQCCNLTERFTEASSVTFTHDETPTVKESPSSHIASGAGSAYYSKDDNSDCTIIEDHSSSFPVSSTTGSKISNTVTPEKSVTANNIPESSLNSSVNSHNQKRRKPTVVPYIDLIEEENHEASSVSTPKWYTKSSVEVREATHETECSLGRISNLQSPQLPTSNLPGSCSLTIPLLDKRLLLFCSLCKNPLGRHENHLSLTCSLISSSIVHLRFLLKKRLATYTADAEKSVPVIVTDSSFVDQRVCNRVPKSTQEEGIWCPEDGCVFSTIFCPFCSNTNNLLGVQIMATNSSNAKLLDKILFFFDSLEVKYQEEAGKSASEEVDFSPITDSGMDGVAALNSFEKYSYVPQPGKSEVWKSRKSKPKLRGSPYAEC* 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0768 1201 Gene3D - 30 316 IPR027417 -
Mtr1g0768 1201 Pfam DEAD_2 125 289 IPR010614 GO:0003677|GO:0003678|GO:0005524
Mtr1g0768 1201 Gene3D - 504 726 IPR027417 -
Mtr1g0768 1201 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 12 1075 IPR045028 -
Mtr1g0768 1201 SMART Cxpdneu3 517 702 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Mtr1g0768 1201 Pfam Helicase C-terminal domain 527 715 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Mtr1g0768 1201 PANTHER FANCONI ANEMIA GROUP J PROTEIN 12 1075 - -
Mtr1g0768 1201 MobiDBLite consensus disorder prediction 890 930 - -
Mtr1g0768 1201 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 20 320 IPR014013 GO:0005524
Mtr1g0768 1201 Coils Coil 282 302 - -
Mtr1g0768 1201 MobiDBLite consensus disorder prediction 1179 1201 - -
Mtr1g0768 1201 MobiDBLite consensus disorder prediction 794 820 - -
Mtr1g0768 1201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 696 IPR027417 -
Mtr1g0768 1201 SMART deadxpd 22 331 IPR006554 GO:0003678|GO:0016818
Mtr1g0768 1201 CDD SF2_C_XPD 491 700 - -
Mtr1g0768 1201 MobiDBLite consensus disorder prediction 778 792 - -
Mtr1g0768 1201 MobiDBLite consensus disorder prediction 771 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0768 Mtr-Chr1 8633454 8647929 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0768 1 8633454 8647929 Mtr1g0768 1 8633454 8647929 ECH