Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0767 ATGCATAGACACGGACACAGAGCTACTCTTGCTCTCCGCTATTCAATTTCAACTTGCAAATGTCAAAGAAATCTCACAATCACAACCACAACCACAGAAGGATCTTCTATGCAAATGCAAATGCAAATTGTGAAGGCACTCCGCTCCGGTGACAGAATAAAGGCTTCCCACTTACTGCTCCATTTTGCTAATACAACCCCCCACTCATTATCCGCCAATCATTTTCTTCCTATCTTTAATTACTGTTTACAATCTCCTGATCCACTGTTTGTTATGGACGTTTTCAGATTAATGGAGTTTAAACAAATTACCATAAATAACAAATGCTCCTCTCTTATCATGCGAGCTCTGAGTAAAGGGGTTTACAAGAAAGAGGCTTTCAGCATCATGGATTTTCTTTCCGAAACTCCGCAATTCTATCCACTTCTCCCTATCTACAATGGTATTTTAAGGTCCTGCACTAAAACCCACAATTTAATTCAAGCAACAAAATGTTTGGACTTGATGGAAAAGAAGATGATAGGGAAGAATGAAGTAACCTATACTGCGCTTCTCCAGTTGAAATCCCTTGGAGAAGAAGGGATGATAAGAGAGATGATCCAATATTTACATGTCGCAGAGAATCTTTTCATATATAGCAACCCTTCATTGGGAACAGATATGTACAACATCGTGTTGCATTATCTTGTTGAAGCCCAAGAAAGCAACATGGCAATTGAAGTTTTCAAGAAGATGAAGTTGTGTGGCTGCCACCCTGATTCCACTACATACAATACAATGATTGACTGTTGTAGTGTTATAAGAAGTTATAGATCTGCTTCTTTGTTGATTGCAATGATGATACGGGAAGGGTTTTGTCCGGTGGTTTGTACATATACTGCTCTCATTAAGATTTTGTTGGAAGATGAGAATTTTAATGAAGCACTGAATGTTCTGGAGAGAATCAAGTTGGATGGCATCCAACTTGATGTACTGCTGTTTAACACGTTTCTTCGACAAGCATGTTACAAGGGAAGAATTGATGTAATTGAGTTTATTGTGGAGTTTATGCACCAAGAAAAAGTTCAGCCTGATCCAACAACATGTGGCTACGTCTTCTCTGCATATGTAAATTCCAGTTTTCACAATACAGCAGTAGAAGCATTGCAGGTTTTAAGTTTGCGTATGATGTCTGTAGATGGCAACATACTTCAAGAGAGGAAAAATTTTGTGGATGAATTCATCCTTGATGAAGATTTAGCTTCTGAGTCACACATATTTAAATTATTTGAAGATTCTGAAGATAAAGTTGCAATAGGGTTGTGGAATTTAAGATGGTGTGCCATGATTGGGTTTCCAATATGTGAGTCAGCTGACCAGAGCCTATGGGCTAAAAGACTCGAGTCGCGATTCCAAAAGAGGCTAGCGTCTGGTTCCATAATAGGAGAGCAATTATGA 1437 0.3869 MHRHGHRATLALRYSISTCKCQRNLTITTTTTEGSSMQMQMQIVKALRSGDRIKASHLLLHFANTTPHSLSANHFLPIFNYCLQSPDPLFVMDVFRLMEFKQITINNKCSSLIMRALSKGVYKKEAFSIMDFLSETPQFYPLLPIYNGILRSCTKTHNLIQATKCLDLMEKKMIGKNEVTYTALLQLKSLGEEGMIREMIQYLHVAENLFIYSNPSLGTDMYNIVLHYLVEAQESNMAIEVFKKMKLCGCHPDSTTYNTMIDCCSVIRSYRSASLLIAMMIREGFCPVVCTYTALIKILLEDENFNEALNVLERIKLDGIQLDVLLFNTFLRQACYKGRIDVIEFIVEFMHQEKVQPDPTTCGYVFSAYVNSSFHNTAVEALQVLSLRMMSVDGNILQERKNFVDEFILDEDLASESHIFKLFEDSEDKVAIGLWNLRWCAMIGFPICESADQSLWAKRLESRFQKRLASGSIIGEQL* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0767 478 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 16 188 - -
Mtr1g0767 478 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 187 467 - -
Mtr1g0767 478 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 253 287 IPR002885 -
Mtr1g0767 478 Gene3D Tetratricopeptide repeat domain 217 415 IPR011990 GO:0005515
Mtr1g0767 478 Gene3D Tetratricopeptide repeat domain 35 216 IPR011990 GO:0005515
Mtr1g0767 478 Pfam PPR repeat family 221 264 IPR002885 -
Mtr1g0767 478 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 218 252 IPR002885 -
Mtr1g0767 478 Pfam Pentatricopeptide repeat domain 311 371 IPR002885 -
Mtr1g0767 478 TIGRFAM PPR: pentatricopeptide repeat domain 221 254 IPR002885 -
Mtr1g0767 478 TIGRFAM PPR: pentatricopeptide repeat domain 256 287 IPR002885 -
Mtr1g0767 478 TIGRFAM PPR: pentatricopeptide repeat domain 290 324 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0767 Mtr-Chr1 8625399 8632692 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0767 1 8625399 8632692 Mtr1g0767 1 8625399 8632692 ECH