Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0752 ATGGGATTAGGATTGTTTAAGGCGTTTTTCTGTTGTACTACAAACCGAGACATTCCCATTGTCTCCTCTTCGGAGTCCTCTCCCAGGCATAGCTCTGGCTATGGCTACAATCAACCAAGTTTTGATCCATCTCCCAAAACCACAAAATCTCCATCTTCTTCTAGTAATCCACAAATAGGTGCAATTTTAGGTAAACCATACGTAGTGATTAACAATATATACGATATGAAGAAAGAACTCGGAAGAGGTCAATCAGGTGTGACATATCTATGCACAGAGAAAACAACTGGAAGAGAATATGCTTGCAAATCGATATCAAGAGCGAAACTATTAAGCGAGCAAGAGATAGATGATGTAAGAAGAGAGGTTATGATTCTGCAACATCTTTCGGGGCAACCGAATATAGTTGAATTCAGAGGAGCTTATGAGGATAAACAGAATGTGTATTTGGTGATGGAGGTTTGTAAAGGTGGTGAACTTTTTGATAGGATTATTGAAAAAGGAAACTATACGGAACGCGAAGCTGCTACTATTATGAGACAGATTGTGAATGTGGTGCATGTGTGTCATTTTATGGGTGTTATGCATCGTGATCTTAAGCCTGAGAATTTCTTGCTTGCTTCAAAAGATGAGAATGCTGCTGTTAAAGCTACTGATTTTGGACTCTCCATTTTCCTTGAAGAAGGTAAAGTATATAAAGAGCTTGTTGGAAGTGCATACTATGTGGCTCCAGAGGTGTTAAAACGGAGTTATGGAAAGGAGATTGATATATGGAGTGCAGGAATCATTTTATATATTCTCCTAAGTGGGGTGCCTCCATTTTGGGCTGAAACCGAAAAAGGCATATTTCAAGCAATTTTAGAAGGTAAGCTTGATCTGGAGAGTGCACCTTGGCCTTCTATTTCAGTTGCTGCAAAAGATTTGATCAGGAAAATGTTGAGTTATGACCCTAAGAAACGCATTACAGCTTCTGATGCCCTTGAACATCCATGGATGAAGGAAGGTGGTGAGGCATCAGACAAGCCTTTAGATAATGCTGTTTTAATTAGGATGAAACAATTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTAATAGCAGAAAACCTTTCAGATGAGGAAATCAAGGGCTTGAAACAAATGTTCAACAATATAGATACCGATCGAAGTGGCACAATCACATATGAAGAACTAAAATCTGGACTGTCCAAATTGGGATCCAAGCTTAGTGAATCTGAAATAAAGCAGCTAATGGATGCTGCTGATGTTGACAAGAATGGAACTATTGACTATCATGAATTCATTACTGCCACAATAAACCGGCATAAACTTGAGAGGGAAGAGAATTTGTTCAAGGCTTTTCAATACTTTGACAAGGATAACAGCGGTTATGTAACAAGAGAGGAACTTAGACAAGCTTTGGCTGAATATCAAATGGGAGATGAAGCAACTATAGATGAAGTCATTGATGATGTTGACACCGACAATGATGGCAGAATTAATTACCAGGAGTTTGCAACTATGATGAGAAAGGGGACCTTGGATAATGATGACAAAGAGAAACCGCGATAA 1578 0.3885 MGLGLFKAFFCCTTNRDIPIVSSSESSPRHSSGYGYNQPSFDPSPKTTKSPSSSSNPQIGAILGKPYVVINNIYDMKKELGRGQSGVTYLCTEKTTGREYACKSISRAKLLSEQEIDDVRREVMILQHLSGQPNIVEFRGAYEDKQNVYLVMEVCKGGELFDRIIEKGNYTEREAATIMRQIVNVVHVCHFMGVMHRDLKPENFLLASKDENAAVKATDFGLSIFLEEGKVYKELVGSAYYVAPEVLKRSYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFQAILEGKLDLESAPWPSISVAAKDLIRKMLSYDPKKRITASDALEHPWMKEGGEASDKPLDNAVLIRMKQFRAMNKMKKLALKVIAENLSDEEIKGLKQMFNNIDTDRSGTITYEELKSGLSKLGSKLSESEIKQLMDAADVDKNGTIDYHEFITATINRHKLEREENLFKAFQYFDKDNSGYVTREELRQALAEYQMGDEATIDEVIDDVDTDNDGRINYQEFATMMRKGTLDNDDKEKPR* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0752 525 ProSitePatterns EF-hand calcium-binding domain. 495 507 IPR018247 -
Mtr1g0752 525 MobiDBLite consensus disorder prediction 22 59 - -
Mtr1g0752 525 CDD STKc_CAMK 74 331 - -
Mtr1g0752 525 ProSiteProfiles EF-hand calcium-binding domain profile. 447 482 IPR002048 GO:0005509
Mtr1g0752 525 ProSitePatterns EF-hand calcium-binding domain. 424 436 IPR018247 -
Mtr1g0752 525 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
Mtr1g0752 525 Gene3D - 340 518 - -
Mtr1g0752 525 Pfam EF-hand domain pair 449 512 IPR002048 GO:0005509
Mtr1g0752 525 Pfam EF-hand domain pair 380 440 IPR002048 GO:0005509
Mtr1g0752 525 SMART serkin_6 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0752 525 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Mtr1g0752 525 ProSiteProfiles Protein kinase domain profile. 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0752 525 SMART efh_1 415 443 IPR002048 GO:0005509
Mtr1g0752 525 SMART efh_1 379 407 IPR002048 GO:0005509
Mtr1g0752 525 SMART efh_1 451 479 IPR002048 GO:0005509
Mtr1g0752 525 SMART efh_1 486 514 IPR002048 GO:0005509
Mtr1g0752 525 ProSiteProfiles EF-hand calcium-binding domain profile. 411 446 IPR002048 GO:0005509
Mtr1g0752 525 SUPERFAMILY Protein kinase-like (PK-like) 72 339 IPR011009 -
Mtr1g0752 525 ProSitePatterns EF-hand calcium-binding domain. 460 472 IPR018247 -
Mtr1g0752 525 Gene3D Phosphorylase Kinase; domain 1 76 159 - -
Mtr1g0752 525 ProSiteProfiles EF-hand calcium-binding domain profile. 483 517 IPR002048 GO:0005509
Mtr1g0752 525 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
Mtr1g0752 525 SUPERFAMILY EF-hand 371 512 IPR011992 -
Mtr1g0752 525 Gene3D Transferase(Phosphotransferase) domain 1 160 339 - -
Mtr1g0752 525 PANTHER SERINE/THREONINE-PROTEIN KINASE 40 518 - -
Mtr1g0752 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Mtr1g0752 525 Pfam Protein kinase domain 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0752 525 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 40 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0752 Mtr-Chr1 8469745 8475532 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr1g0752 Pkinase 1.9e-76 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0752 1 8469745 8475532 Mtr1g0752 1 8469745 8475532 ECH