Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0734 ATGAAGTTCCCAATTTTCACTACAATTATCCTCTTTTTGACGATGCTTTTTGCTATTTTTAGCAAAACAAAAGCTATTTTGAAACTGCCACCAAATGCTTCGTTTCCAGCAGTGTTTGTATTTGGAGATTCAATCATGGATACTGGAAATAACAACAACAGGCCAACACCAACTCAGTGCAAATTCCCTCCATATGGAAAAGATTTTCAAGGAGGAATTCCAACAGGAAGATTTAGCAATGGAAAGGTTCCAGCAGATCTTATAGTTGAAGAATTAGGCATTAAAGAATATCTACCAGCATATTTGGATCCAAATCTTCAGCCTAGTGAATTGGTTACAGGCGTTAACTTTGCGTCCGGTGGTGCAGGATATGATCCTTTGACATCAAAAATAGAGGCAGCTATATCAATGTCTGCCCAGATAGAATTATTCAAAGAATATATTGTGAAGCTGAAAGGAATAGTTGGTGAAGATAGAACAAACTTCATCTTAGCCAATAGTATTTATTTTGTGCTAGTAGGAAGCAATGATATTTCTAACACATACTTCTTGTTTCATGCGAGACAAGTTAATTATGATTTTCCTTCATACTCTGACCTTTTAGTAGACTCAGCTTATAATTTCTACAAGGAAATGTATCAACTAGGTGCAAGGAGGATAGGAGTATTCAATGTACCACCAATTGGGTGCGTGCCGTTTCAGAGAACAGTGGCCGGAGGAATAACAAGAAAATGTGTGCAACATTACAATGATGCAGTTGTTTTCTTTAACAAAAAGTTGTCAATGAAGATTGATTCCTTTAAGCAGAATTTTCCAAGTAGCAGGATTGTTTATATGGATGTTTACAACCCTATACTTGATATCATTGTAAACTACCAAAAATATGGCTTCAAAGTTGTAGATCGAGGGTGTTGCGGCACAGGCGAAATCGAAGTTATTTTTTTATGCAACCATTTGGAACCCACTTGTGTCAACGACTCGGATTATGTGTTTTGGGATGCTTTTCATCCTACTGAAGCCGTTTACAAAATACTTGTTGCCCTAAGTCTACAAAAATACATGTACAACTTTATTTAG 1077 0.3649 MKFPIFTTIILFLTMLFAIFSKTKAILKLPPNASFPAVFVFGDSIMDTGNNNNRPTPTQCKFPPYGKDFQGGIPTGRFSNGKVPADLIVEELGIKEYLPAYLDPNLQPSELVTGVNFASGGAGYDPLTSKIEAAISMSAQIELFKEYIVKLKGIVGEDRTNFILANSIYFVLVGSNDISNTYFLFHARQVNYDFPSYSDLLVDSAYNFYKEMYQLGARRIGVFNVPPIGCVPFQRTVAGGITRKCVQHYNDAVVFFNKKLSMKIDSFKQNFPSSRIVYMDVYNPILDIIVNYQKYGFKVVDRGCCGTGEIEVIFLCNHLEPTCVNDSDYVFWDAFHPTEAVYKILVALSLQKYMYNFI* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0734 358 CDD SGNH_plant_lipase_like 36 353 IPR035669 -
Mtr1g0734 358 Gene3D SGNH hydrolase 27 354 IPR036514 -
Mtr1g0734 358 SUPERFAMILY SGNH hydrolase 37 350 - -
Mtr1g0734 358 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 38 49 IPR008265 GO:0006629|GO:0016298
Mtr1g0734 358 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 16 354 - -
Mtr1g0734 358 PANTHER GDSL ESTERASE/LIPASE EXL3 16 354 - -
Mtr1g0734 358 Pfam GDSL-like Lipase/Acylhydrolase 38 345 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0734 Mtr-Chr1 8318062 8322440 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0734 1 8318062 8322440 Mtr1g0734 1 8318062 8322440 ECH
Mtr3g4283 3 56694827 56700249 Mtr1g0734 1 8318062 8322440 PCT