Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0713 ATGTCTGTTTCTGTTTCTGTTACTGTTACTGTTACCTCTACCGTGGGACCCTTTCTTCCACGATCCCATCGGCGATCAACAACAGCCGTCCGATCCAACAAGGTTTCAGTTGGACCAACGAGATTATTAACGAAACTCAAACAAGACTGTGCAACTCCTCTACCTCTTCTTCACCATGTTGCTGATGCAATGTCTTCTGAAATGCGGGCTGGGCTTTCCTCCGTTGATGGGCCCGGGCTTCCCATGATACCAACTTATGTCCACACTCTTCCCTCCGGGAATGAGAAAGGGTTGTTTTATGCATTGGATCTTGGAGGAACAAACTTTCGTGTGTTGAGGGTACAATTAGGTGGCAAAGATGATCGTGTCATTGATGTTGACTTTGATCAAGTTGCTATACCTCATGATCTAATGTTTGCTACGTCCGAGGAGCTGTTTGATTTCATTGCTTTGGGGCTAGCCAAATTTGTGGACAAAGAAGATAGTAGATTTCATTTTCCTCCAGGAAGAAAGAGAGAGATTGGTTTCACATTTTCATTTCCTGTCAAACAAACTTCTATTGACTCTGGCATACTAATCAAGTGGACCAAGGGTTTTGCTGTTTCTGGAACTGTTGGAAGAGATGTAGTTGCTTGTTTGAACGAGGCTTTGGAAAGACAAGGACTAGATATGCGAGTTTCTGCTCTGGTTAATGATACTGTTGGAACACTAGCCGGAGCAGAATACTACGACAATGATGCTAAGGTTGCTGTTATTTTAGGAACTGGAACTAATGCTTGTTATATCGAGAAGTTAAGTGCCATTCCCAAATTACAAGGCCATGTTTCTTCTTCTGGTAAAATGATCATTAGTACTGAGTGGGGTGCTTTCTCAAATGGTCTCCCTTTAACTGTATTTGATAGAGAAATGGATGCTGCTAGTATCAATCCTGGTCACCATATTTTTGAGAAGACAATCTCAGGAATGTATCTAGGTGAAATTGTGAGACGAGTGCTAGTCAATATGGCTGAAGAGGAAGGTTTATTTGGGATATCTGTCCCTCAAAAATTGTCCATGCCTTTCATACTCGGAACCCCGGATCTAAGCGCCATGCAGCAAGATAATTCTGGCGATTTACAAGCAGTTGGGTCCCTCCTCTATGATAAAGCAGGGCTTGAATCCAATCTAAGTGAAAGAAAAACAGTTCTAGAGGTTTGTGATACAATTGTAAAGCGAGGCGGTAGCTTAGCTGGTGCAGGAATTGTCGGGATTCTGCAAAAAATGGAAGAGGACTCAAAAGGTCTTATCTTTGGAAAGAGAAGCGTTGTTGCCATTGATGGGGGTTTGTATGAAAATTATCCTCAATACAGGACTTACTTGCAACATTCAGTAAAGGAGCTATTAGGAACAGAAAAGTCAAACAATGTTGTTATAGAACATTCAAAAGATGGTTCTGGTATTGGAGGTGCTCTATTGGCAGCTTCAAATTCCATGTATTAA 1479 0.4185 MSVSVSVTVTVTSTVGPFLPRSHRRSTTAVRSNKVSVGPTRLLTKLKQDCATPLPLLHHVADAMSSEMRAGLSSVDGPGLPMIPTYVHTLPSGNEKGLFYALDLGGTNFRVLRVQLGGKDDRVIDVDFDQVAIPHDLMFATSEELFDFIALGLAKFVDKEDSRFHFPPGRKREIGFTFSFPVKQTSIDSGILIKWTKGFAVSGTVGRDVVACLNEALERQGLDMRVSALVNDTVGTLAGAEYYDNDAKVAVILGTGTNACYIEKLSAIPKLQGHVSSSGKMIISTEWGAFSNGLPLTVFDREMDAASINPGHHIFEKTISGMYLGEIVRRVLVNMAEEEGLFGISVPQKLSMPFILGTPDLSAMQQDNSGDLQAVGSLLYDKAGLESNLSERKTVLEVCDTIVKRGGSLAGAGIVGILQKMEEDSKGLIFGKRSVVAIDGGLYENYPQYRTYLQHSVKELLGTEKSNNVVIEHSKDGSGIGGALLAASNSMY* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0713 492 SUPERFAMILY Actin-like ATPase domain 38 244 IPR043129 -
Mtr1g0713 492 ProSitePatterns Hexokinase domain signature. 174 199 IPR019807 GO:0004396|GO:0005524|GO:0006096
Mtr1g0713 492 Gene3D - 63 475 - -
Mtr1g0713 492 PRINTS Hexokinase family signature 100 116 - -
Mtr1g0713 492 PRINTS Hexokinase family signature 174 199 - -
Mtr1g0713 492 PRINTS Hexokinase family signature 226 242 - -
Mtr1g0713 492 PRINTS Hexokinase family signature 249 263 - -
Mtr1g0713 492 PRINTS Hexokinase family signature 313 335 - -
Mtr1g0713 492 PRINTS Hexokinase family signature 395 417 - -
Mtr1g0713 492 PRINTS Hexokinase family signature 472 488 - -
Mtr1g0713 492 Gene3D - 85 486 - -
Mtr1g0713 492 Pfam Hexokinase 44 242 IPR022672 GO:0005524|GO:0005975|GO:0016773
Mtr1g0713 492 Pfam Hexokinase 248 487 IPR022673 GO:0005524|GO:0005975|GO:0016773
Mtr1g0713 492 PANTHER HEXOKINASE-LIKE 1 PROTEIN-RELATED 23 492 - -
Mtr1g0713 492 SUPERFAMILY Actin-like ATPase domain 247 488 IPR043129 -
Mtr1g0713 492 ProSiteProfiles Hexokinase domain profile. 37 487 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Mtr1g0713 492 PANTHER HEXOKINASE 23 492 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Mtr1g0713 492 CDD NBD_sugar-kinase_HSP70_actin 101 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0713 Mtr-Chr1 8080945 8083874 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0713 1 8080945 8083874 Mtr1g0713 1 8080945 8083874 ECH