Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0709 ATGGCTCTTCTTAATTCCTTGCCTGAACAATCCCACCCCAAAACCAAAACAACACTCCCAAAACACAAACAAAAGAACCAACAACAACAGAAACAAAAACCACCTTCTTCATGGGACCAAATAAAAAACCTCCTAACATGCAAACAGATCGAAGTTTCAAGAGTTCATGATCCTTCAAAACCAAACAACAATAATGGTTACTCAAAATTAGGTTCTTCTTGTAGCTCCATTTGTAGCTTTAGAGATGTTGTTCATGGAAACACTAGAGTTGTTCATAGGTCTGATAATTCATCACCAGAGAGTAGTATCTTGGGTCAAGAAACAAGTTTACTCAAAAGAAAACCTGTTAATGCTTCATCAACTCGCTCTGCATCATGTTCTGGGAAATCATCCAACGGTGGAGGAAACTACACATCATCATCATCTTCAAGAGGAATGCAGTTTAGGAAGCTATCTGGATGTTATGAATGTCACATGATCGTTGACCCTAGCAGGCTACCAATTCCTAGGAGCACATTATGTCGTTGTGATCAATGTGGAGAGGTCTTCCCTAAGATTGAAAGCTTGGAACTTCATCAAGCTGTTCGACATGCAGTTTCGGAGCTGGGTCCAGAGGATTCAGGTAGGAACATAGTAGAGATAATCTTCAAATCTAGCTGGTTAAAGAGAGAGACTCCAATGTGCAAGATTGAACGGATACTAAAAGTCCACAACACACAACGAACAATCCAACGGTTCGAGGAATGCAGAGACGCAGTAAAATCCCGTGCATCCAACACCACCAAGAAAAATCCCCGGTGTGCCGCGGACGGCAATGAACTCCTCCGTTTCCACAGCACATCGTTATCGTGTGCACTCGGTGCAAGTGGTTCCTCCACCCTTTGCGCTGTGCCTGGATGCGGTGTTTGCAACATCATCCGCCACGGTTTTCAAAAGAAAGGTGGAGTGAAGACCAATGCTAGTAGTGGTAGGGCCCATGACAATTCGGTTGGAGAAGATTCTAGAAGGGCAATGCTGGTGTGTCGTGTGATTGCCGGGAAAGTGAAGCGCGTGGCGGAGGAAGGTGCACGGGTAGTGTCGGAGGAGGAAATGGTGTGTTTTGATTCTACTGCGGGGAATGCTGGGAGTTACTCAAATCTAGAAGATTTAACTGTTTTCAATCCTAGAGCTATTCTTCCTTGCTTCGTAGTCATTTACGAGGTGCTTCCATGA 1212 0.4439 MALLNSLPEQSHPKTKTTLPKHKQKNQQQQKQKPPSSWDQIKNLLTCKQIEVSRVHDPSKPNNNNGYSKLGSSCSSICSFRDVVHGNTRVVHRSDNSSPESSILGQETSLLKRKPVNASSTRSASCSGKSSNGGGNYTSSSSSRGMQFRKLSGCYECHMIVDPSRLPIPRSTLCRCDQCGEVFPKIESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKRETPMCKIERILKVHNTQRTIQRFEECRDAVKSRASNTTKKNPRCAADGNELLRFHSTSLSCALGASGSSTLCAVPGCGVCNIIRHGFQKKGGVKTNASSGRAHDNSVGEDSRRAMLVCRVIAGKVKRVAEEGARVVSEEEMVCFDSTAGNAGSYSNLEDLTVFNPRAILPCFVVIYEVLP* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0709 403 MobiDBLite consensus disorder prediction 90 144 - -
Mtr1g0709 403 ProSiteProfiles Zinc finger C2H2 type domain profile. 174 202 IPR013087 -
Mtr1g0709 403 MobiDBLite consensus disorder prediction 22 39 - -
Mtr1g0709 403 ProSitePatterns Zinc finger C2H2 type domain signature. 174 197 IPR013087 -
Mtr1g0709 403 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 22 401 - -
Mtr1g0709 403 SUPERFAMILY ADP-ribosylation 199 400 - -
Mtr1g0709 403 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 22 401 - -
Mtr1g0709 403 Gene3D - 198 401 - -
Mtr1g0709 403 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0709 Mtr-Chr1 8027902 8031501 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr1g0709 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0709 1 8027902 8031501 Mtr1g0709 1 8027902 8031501 ECH