Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0684 ATGCATGAACGAATGGAGCGTTTTGATCAGAAAAAAGTTCATGCATTTGGTTCTCCAAAACCCCCAATTCAATTGAATCCTATGCCTATTAATCAAATTAATCAAATGGGTTTTCCTGAAAATCACAAAAGTTCTGGTTTTGGTATTCCACCTTCATACCCTAACCCTAATACCAGTTTATCACCTAAACCATCATCTCCTTATCCCCAATTTATGCCTCCACAATCTCAAACTCATTCCAGGTCTTTGTCACAACCTACTTTTTTATCTCTTGATTCCTTTTCTTTGCCACCATTGAGTCCTTCCCCTTCCCCTTCCCCTTATCATTTAAGTTCTAACCCCTTTTCGGAATCGGGTTCGAAAGATGTTTCTATGGAGGATGGCTTGGGTTTTGGTGCCCATCATGTACCTTCGCCTAACCGCGGTCATGCTGTTCAACATGGTCATTGTCTTCCGCCTCGTAAAGGGCATAGGCGGTCTAGCAGTGATTCTCCTTTAGGGATATCAGAATTTGTTAACTCTGAGCCTCAGCTGGTGACACCTCAGCTGGTGAGTGTCAGTGATCGTCGGAATTTGGTGTCTGGAGGAGAGAAACCTGGTTATGAGAAGCCGATTCAGTTGGTGTTGAAGGATAGGGACTGTGTTGATGGGTTTAGAGGAGAGAGTTTCGATGGGAGGAAAGAGAATGTTGGAGCTGAAATGGATGATTTGTTTAGTGCTTACATGAATTTGGAGAATATGCACAATATGAGTTTTTCGGGTATGGAAGATAGCAGAACCAGTGGTTCGAAGACGGTTGAAAGCAGTGATAATGAAGCTGAGAGTCGTGTAAATGTGAAAGGAATAGGTGCTAAGGGTGCGAGTTCAAGCTGTTCGGATGAGAGAAGGGAAGGAGTCAAGAGGAGTTCTAATGGAGATATTGCTCCCAGTGGTCGACATAGGAGAAGTTACTCATTGGATAGTTCCATTGAAAATTTTAATATTGAAGATCATAAGCTTCCTCCTTTACAAGGTCGACCTGGTCAACACTCGCCTAGCAATTCAATGGATGGTAGTAAAACACCAGAAATCAGCATGGAGTTTGGAAATGGTGAATTCAGCTCACAGGAGATGAAGAAAATAATGGAAAATGATAAACTTGCTGAAATTGCTGCGGCTGATCCCAAGCGTGCAAAGAGGATTTTGGCTAATCGTCAATCAGCTGCTCGCTCAAAGGAGCGGAAGATGAAATACATTTCTGAATTGGAGCAGAAGGTCCAAACTCTTCAGACCGAAACTACTACATTGTCTACTCAGTTTACGAAATTACAGATGGATCATCAAGAGGCTAAAAGTGAGAATAAAGAGTACAAATTGAGGCTTCAATCCTTGGAACAACAGTCCCAACTGAAAGATGCTTTGAATGAGACTTTGAATGCTGAAGTCCGGCGCTTAAGACGCACTGTAGCAGATCTAGGCGGAGAGTCTACCCTCTCAGGTCTCATGGTTCGACAGCTTGCTATTAACCAACAGATGTTCCAGCCGCAGCATCAGCAGCCAAACCAGCTTAGAAATTTCCAGCCGCAAAACAGCGTATCTCAGGAAGAAACACAGACTCAGTCGCAGCAGCATATTCAACGCAATCATGAATTCCAATCGAAGCATCAGAATGGCAAAACCACTGCCTAA 1668 0.4323 MHERMERFDQKKVHAFGSPKPPIQLNPMPINQINQMGFPENHKSSGFGIPPSYPNPNTSLSPKPSSPYPQFMPPQSQTHSRSLSQPTFLSLDSFSLPPLSPSPSPSPYHLSSNPFSESGSKDVSMEDGLGFGAHHVPSPNRGHAVQHGHCLPPRKGHRRSSSDSPLGISEFVNSEPQLVTPQLVSVSDRRNLVSGGEKPGYEKPIQLVLKDRDCVDGFRGESFDGRKENVGAEMDDLFSAYMNLENMHNMSFSGMEDSRTSGSKTVESSDNEAESRVNVKGIGAKGASSSCSDERREGVKRSSNGDIAPSGRHRRSYSLDSSIENFNIEDHKLPPLQGRPGQHSPSNSMDGSKTPEISMEFGNGEFSSQEMKKIMENDKLAEIAAADPKRAKRILANRQSAARSKERKMKYISELEQKVQTLQTETTTLSTQFTKLQMDHQEAKSENKEYKLRLQSLEQQSQLKDALNETLNAEVRRLRRTVADLGGESTLSGLMVRQLAINQQMFQPQHQQPNQLRNFQPQNSVSQEETQTQSQQHIQRNHEFQSKHQNGKTTA* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0684 555 CDD bZIP_plant_RF2 390 419 IPR044759 GO:0003700|GO:0006355
Mtr1g0684 555 SMART brlzneu 385 449 IPR004827 GO:0003700|GO:0006355
Mtr1g0684 555 Coils Coil 405 488 - -
Mtr1g0684 555 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 387 450 IPR004827 GO:0003700|GO:0006355
Mtr1g0684 555 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 64 555 - -
Mtr1g0684 555 MobiDBLite consensus disorder prediction 55 71 - -
Mtr1g0684 555 Pfam bZIP transcription factor 389 448 IPR004827 GO:0003700|GO:0006355
Mtr1g0684 555 PANTHER BZIP TRANSCRIPTION FACTOR 64 555 - -
Mtr1g0684 555 MobiDBLite consensus disorder prediction 140 164 - -
Mtr1g0684 555 Gene3D - 388 442 - -
Mtr1g0684 555 MobiDBLite consensus disorder prediction 340 354 - -
Mtr1g0684 555 MobiDBLite consensus disorder prediction 27 41 - -
Mtr1g0684 555 MobiDBLite consensus disorder prediction 1 127 - -
Mtr1g0684 555 MobiDBLite consensus disorder prediction 507 540 - -
Mtr1g0684 555 MobiDBLite consensus disorder prediction 252 268 - -
Mtr1g0684 555 MobiDBLite consensus disorder prediction 331 361 - -
Mtr1g0684 555 MobiDBLite consensus disorder prediction 72 97 - -
Mtr1g0684 555 MobiDBLite consensus disorder prediction 507 555 - -
Mtr1g0684 555 MobiDBLite consensus disorder prediction 252 317 - -
Mtr1g0684 555 SUPERFAMILY Leucine zipper domain 389 437 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0684 Mtr-Chr1 7688837 7692553 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr1g0684 bZIP_1 4.2e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0684 1 7688837 7692553 Mtr1g0684 1 7688837 7692553 ECH