Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0677 ATGGATGATAATCAAGATTTGAGGTTGAAGAAGAAGAAGAGATCCAAACCAATTGAAATTGATTTTGATTCGGATAACGATGAGCCGATTGGTTCTTTGTTTAAGATTAAGAGGAATAAGAAGAAGGTTAATTTTGTTGCATCAGAGAGTGGAATTAGGGAAAATGATAGTTCTAGGGTTATGGATGATAATGAACCATTGGCTAGCTTTAGGAAGAGATTGAAGGGTCCAAAGAGAGATCAGGGATCTGGTTTGAATGATGATTTGGTTGGTGGTGGATCTGGGAGTGTTTCGATGGACGAGAAAAAGGTGGATTTGTTGGTTGGTGATAATGATATGCAGGTGAATGATTCTGCTGATCAGAATATGGAAGAAGAATCGTTGTCGGTGATTTTCCATAAGGTGCAATCGAAGAAGAAAAGAGGGAATCGGAATGTTGATAGCGGGTTGAAACATGGATGCGAAAGTTTAACCGAAAATGTAGATTCAATGGTTGAAAGTAGATCTGGATCTGCTTCTGCGTCGAAATCGGTTGAGGGGAGGCAGGAATCTGATACATTTTGTTCGGTGTCTGCAATGGATGAACAAAAGGGTGGTGATGAATGTTTTCAAGAGGAAAAGGTGAAGGGTATCTGTGATGATTCAAACATTCCTGATGGCTCGTCGGTTGATCACTCTAAATCACTTATCGCCTGTGATGGAGACAGGCAGCAATCTGACACGTTTTGTTTGGTGTCTGCAATGGATGAACAAAAGGGTGGTGATGAATGTTTACAAGAGGAAAGGGTTAAGGGTATTTATGATTCAAACATTCCAGATGGATCGTCGGTTGATCCCTCTAATTCAATTATCGTTTGTGATGGAGATAGGCAGCAATCGTCAAGTGTACAGGTTGAAGATGTTTGCCGTGCTTCTGACAAAAAGGTTGCATTGCAAGAAAAATTTAATGATAAAAGCTTGAATCAGTGTTCGGACATGTTACCAGATGTTGAAGTAATTGATACCGGCTCTCCCTCTGACTTGGAGGATGGGGTATGTGGACTTTCTGACTCAAAAGAGCTTGAGAATAAATCAGTTGATGCAATAGCAGAAGAGAAAGTGTGTAATGGTGCTTCAGAAGGAGGTGTTTCCACTTCCACTGGAAAAGAAATTTTGTTAACTTGTCACACTGGGCTCTTGATAGAATCAAATGTAAACATATTGAAGGAAAATGATGCCATGGTTTCTGGAAAGACTCTCCTGGAATCATCAATCAATGGAGATATAAAAATGGATACTGAATTTGTTTCTGGTGGAAATTGCTATGATTGTAGTACTTCGGATGCAAATGCTGAAGTGCAAGATGTTGTAGGCTGTTCACCTGAAAAATTTGATGCAATTGCCAGTGGTAGTTTATCCGCTATTGTGCCTAATGATGCCAATGAATCTGAATTGGTTGTCCAGTCAAATCACCCGGACAAACCTCTGGAAATGTGCGATGTTCCAAAATATTCTACTGCTTCAATTCTGAAATGCAGCTCTGTGTCAGATCCAATTCAATCTGATGGATGCTCTATACAATCTTCAATTCCAGATGAAAATGGGAACGTTGCAGAATATCATGCCTCTGTGTCTGATTTTGCTGATAATGGTGGTAAGATATCAGGCAATCCTCGTACAATACGAAAGACCAAAATGCATAAGCATGGTGACATGACTTATGAAGGGGATGCTGATTGGGAGATTTTAATAAATGATAAAGCTCTAAATGAAAGCCATGGTGCTGCAGATGGTGAGCGTAGTCTTAAAACAAGAGTGAAGCAGGATTCCTCTTTGAATGATGCCGAGGACTCTGAAAATGTTGCAGTAGCGGCAGTATCTGCTGGGCTGAAAGCTTGTGCAGTTTGTCCAATTGAGAAAATAAAATTTAAGGAGATCTTGAAGCGTAAAGGTGGTCTCAAGGAATATTTAGATTGCAGGAATCAGATCTTAAGCTTATGGAGCAGTGATGTCACACGTATTTTACCTCTTTCTGAATGTGGAGTTGGTGATGCCCGTTCAGAGAATGAAAGTTCTCGCTCTTCTCTTATTAGGGAGGTCTATGCATTTCTTGATCAATATGGCTATATAAATGTTGGAGTTGCCTCTCAAAAGAAGAATGTTGAGAGCAGTGCAAGACATTGTTATAAACTTGTAAAAGAAAAAGGATTCGAGGAAAGTTCCACAGCTTCATTGGCCGGCTCTGAAGATGGAGTTTCTTTTATTGTTGGTCAGACTAAAATGTCATATGCTTCTATGGATATTAACGATGGCCCAGTAAAGGATTTTGAAGACCTGGCAACTGAAGCTACAGAAGGCATGATGCATGTTAATGAAGCAATGCCGGATTCATCAAACATGGCACAATATGAAAGAAAAAAATATGATGACCAGGAAAACGTTGGGATTCTGGATGGGTTTCCCGATTGCAGATTGATTTCGCTTGCTGTTGCAAAGCAAAACAATGAATCTAAATGTGTTACACATGCCTTAGGTGATCAGATAGGTGATACTCTGCAGTCCAATTTAGAGGCTAAAAAGAGAGTGATTATCATTGGAGCTGGTCCTGCTGGGCTAACCGCTGCTCGCCACTTGAATCGTCAGGGCTTTACCGTAACTGTGCTTGAGGCTAGGAATAGAATAGGAGGTCGGGTATTTACAGATCACTCATCTCTTTCTGTCCCTGTGGATCTTGGTGCCAGCATTATCACAGGTGTAGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCCTCGTTGGTTTGTGCTCAGCTTGGCCTTGAATTGTCAGTGTTAAACAGTGACTGCCCTCTATATGACATAGTAACTGGACAAAAAGTTCCCGCAGATATGGATGAAGCATTGGAAGCTGAATACAACAGTCTTCTTGATGACATGGTACTGGTTGTTGCTCGGAAAGGCGAACAAGCAATGAAAATGTCTCTTGAAGACGGTTTAGAATACGCCCTTAAGATTCGTCGCACGGGACACTCTGAAGGTAGTAAAGAAATTAAGCAAAGTAACTCTGCAGATCATCCATTTGATTCCAAAAGAGATGGTGCTATGGAACAAAATTTTGATGAGGAGATTTTGGATCCTCAAGAGAGGAGGGTTATGGATTGGCATTTTGCTCATTTGGAATATGGCTGTGCTTCTTTGCTTAAAGAAGTTTCTCTTCCCCATTGGAACCAAGACGATGTGTATGGAGGATTTGGGGGACCTCATTGTATGATCAAAGGAGGTTATAGCACTGTTGTTGAGTCTCTCGGAGAAGGGCTTGTTATTCACCTGAACCACGCCGTAACAAATGTGTCATATGGTATCAAGGAACCTGGCGAGAATAATAAAGTCAAAGTTTCTACATTGAATGGCAGTGAGTTTTTTGGAGATGCTGTTCTCATTACTGTCCCACTTGGCTGTTTGAAGGCTGAAACTATACAGTTCACCCCCTCTTTGCCGGAGTGGAAATGTTCTTCCATTCAGCGTCTTGGCTTTGGAGTTCTCAATAAAGTGATTTTGGAATTTCCTACTGTGTTTTGGGATGATGCAGTGGACTACTTTGGAGCAACAGCTGAGGAGAGAAGCAAACGAGGTCACTGCTTTATGTTCTGGAATGTCAAGAAAACGGTTGGGGCTCCTGTCCTTATAGCATTAGTGGTTGGTAAGGCAGCCATAGATGGTCAAAGTTTAAGCTCTCAAGATCATATCAACCATGCATTGAAGGTTCTTCGAAAACTTTTTGGGGAGGATTCTGTTCCTGATCCTGTTGCATATGTTGTGACCGATTGGGGCAGGGATCCCTATAGCTTTGGTGCTTACTCTTATGTTGCTGTTGGAGCATCAGGAGAAGACTATGACATCATAGGAAGACCAGTTGATAACTGCTTGTTTTTCGCTGGTGAAGCAACCTGCAAAGAGCACCCTGATACTGTTGGTGGTGCAATGATGAGTGGACTACGAGAGGCTGTTCGCATAATTGACATTTTGAACACCGGAAATGATAATACTGCAGAGGTAGAGGCATTGGAAGCTGCACAGGGACAGTTGGACACCGAAAGGAATGAAGTTAGGGATATAATAAAGAGACTTGATGCACTTGAACTTTCTAACATAATGTATAAGAACTCTTTTGAGGGTGCTCAAATCTTAACCCGGGAAGCTTTATTAAGGGAAATGTTCCTCAATGTGAAAACCAATGCTGGGCGCTTGCATGTGGCCAAACAATTGCTAAGTCTTCCTATTGGAAACTTGAAGTCCTTTGCTGGAAGTAAAGAGGGGCTAACTGTTCTCAACTCCTGGATACTGGACTCAATGGGCAAGGATGGTACCCAACTCTTGAGGCATTGTTTGCGTCTTCTTGTGCGTGTGTCGACTGATCTAGGTGCTGTACGCTTATCAGGAATGGGGAAAACAGTGAAGGAAAAGGTTTGTGTGCACACTAGCCGTGATATTCGAGCTATAGCTAGTCAATTGGTCAATGTATGGCTTGAAATTTTCCGTAAAGAAAAAGCTTCTAATGGGGGATTGAAGTTGTCAAGACAAGCAGCTACTGTAGAATTATCAAAGAGAAAATCTTTAAAAGAATCAGCTTCGGGAAAGCCTCCTTTGAGCACACATCAGGGTGCCATTGAGAATAAAGGAGGCTTGCTGAATCCTGTGTCTGCTGGAAGCAATTCACCTTCCACCACACATGCGAAGAAATTACACAGCAAACAAGGACGACAACCATCAGGATGTGACTCAAGGCATGAAGTCAGTTCTTCCAGGTCCCAAGGTTCAATAGACAAAATAGCTACTAAGGAGGAAAGAAACCACTATGCAATGTCTGAAGAAGAAAAGGCTGCTTTAGCTGCTGCAGAAGCTGCCCGTACTCAAGCAATTGCTGCTGCTCAGGCATATGCCTCTGCAGAAGCTAGGTGCAGTACACTGTTACAGCTTCCGAAGATACCCTCATTCCATAAGTTTGCTAGACGGGAACAGTATTCACAAAATGATGAGTATGATAGTAGAAAAAAGTTGTCTGGTGGTTTTTTTGGAAGGCAAGATTGTGTTTCCGAGATTGATTCTAGGAATTGCAGAGTCAGGGACTGGTCTGTTGATTTTTCCACTGCCTGTGTAAATCTTGATAATTCTAATATACCAGTTGACAACCTCTCACAGAGGAGTCATTCTAATGAGATCGCCAGTCATTTGAATTTCGGAGAGCGCTCAGGAGAAAGTGCTGCCGTGGACAGCAATCTATATACAAAAGCTTGGATTGACACAACTGGTGATGGGGTAGTAAAAGACCATCTTGCCATAGAGAGATGGCAATCTCAAGCAGCTGAAGCCGATTCTCATTTTTCTAATCCAACCAGTCATTTGAAGGATGAGGAGGACTCAAATGCCTATTCAAGCTTACCCAGCTGGAAACATGAGGGTATAGCAAATGAGAGCTCTGTTTCCCAGGTTACTGTAAATAAGGAGGCCCTTAAAGGTCACTCTAGAGGAGCAGATCATATTAAACAGGCTGTTGTTGACTATGTTGGATCACTACTTATGCCCCTGTATAAGGCTAGGAAGCTAGACAAGGATGGATACAAGGCAATAATGAAGAAAAGTGCAACAAAGGTTATGGAGCAAGCAACGGATGCAGAAAAAGCCATGACTGTTCGTGACTTTCTAGATTTTAAGCGAAGGAATAAGATTCGCTCCTTTGTGGATGTATTGATTGAAAGACATATGGCAACAAAACCTGGTACAAAATCTTAA 5772 0.4189 MDDNQDLRLKKKKRSKPIEIDFDSDNDEPIGSLFKIKRNKKKVNFVASESGIRENDSSRVMDDNEPLASFRKRLKGPKRDQGSGLNDDLVGGGSGSVSMDEKKVDLLVGDNDMQVNDSADQNMEEESLSVIFHKVQSKKKRGNRNVDSGLKHGCESLTENVDSMVESRSGSASASKSVEGRQESDTFCSVSAMDEQKGGDECFQEEKVKGICDDSNIPDGSSVDHSKSLIACDGDRQQSDTFCLVSAMDEQKGGDECLQEERVKGIYDSNIPDGSSVDPSNSIIVCDGDRQQSSSVQVEDVCRASDKKVALQEKFNDKSLNQCSDMLPDVEVIDTGSPSDLEDGVCGLSDSKELENKSVDAIAEEKVCNGASEGGVSTSTGKEILLTCHTGLLIESNVNILKENDAMVSGKTLLESSINGDIKMDTEFVSGGNCYDCSTSDANAEVQDVVGCSPEKFDAIASGSLSAIVPNDANESELVVQSNHPDKPLEMCDVPKYSTASILKCSSVSDPIQSDGCSIQSSIPDENGNVAEYHASVSDFADNGGKISGNPRTIRKTKMHKHGDMTYEGDADWEILINDKALNESHGAADGERSLKTRVKQDSSLNDAEDSENVAVAAVSAGLKACAVCPIEKIKFKEILKRKGGLKEYLDCRNQILSLWSSDVTRILPLSECGVGDARSENESSRSSLIREVYAFLDQYGYINVGVASQKKNVESSARHCYKLVKEKGFEESSTASLAGSEDGVSFIVGQTKMSYASMDINDGPVKDFEDLATEATEGMMHVNEAMPDSSNMAQYERKKYDDQENVGILDGFPDCRLISLAVAKQNNESKCVTHALGDQIGDTLQSNLEAKKRVIIIGAGPAGLTAARHLNRQGFTVTVLEARNRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLVCAQLGLELSVLNSDCPLYDIVTGQKVPADMDEALEAEYNSLLDDMVLVVARKGEQAMKMSLEDGLEYALKIRRTGHSEGSKEIKQSNSADHPFDSKRDGAMEQNFDEEILDPQERRVMDWHFAHLEYGCASLLKEVSLPHWNQDDVYGGFGGPHCMIKGGYSTVVESLGEGLVIHLNHAVTNVSYGIKEPGENNKVKVSTLNGSEFFGDAVLITVPLGCLKAETIQFTPSLPEWKCSSIQRLGFGVLNKVILEFPTVFWDDAVDYFGATAEERSKRGHCFMFWNVKKTVGAPVLIALVVGKAAIDGQSLSSQDHINHALKVLRKLFGEDSVPDPVAYVVTDWGRDPYSFGAYSYVAVGASGEDYDIIGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILNTGNDNTAEVEALEAAQGQLDTERNEVRDIIKRLDALELSNIMYKNSFEGAQILTREALLREMFLNVKTNAGRLHVAKQLLSLPIGNLKSFAGSKEGLTVLNSWILDSMGKDGTQLLRHCLRLLVRVSTDLGAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVNVWLEIFRKEKASNGGLKLSRQAATVELSKRKSLKESASGKPPLSTHQGAIENKGGLLNPVSAGSNSPSTTHAKKLHSKQGRQPSGCDSRHEVSSSRSQGSIDKIATKEERNHYAMSEEEKAALAAAEAARTQAIAAAQAYASAEARCSTLLQLPKIPSFHKFARREQYSQNDEYDSRKKLSGGFFGRQDCVSEIDSRNCRVRDWSVDFSTACVNLDNSNIPVDNLSQRSHSNEIASHLNFGERSGESAAVDSNLYTKAWIDTTGDGVVKDHLAIERWQSQAAEADSHFSNPTSHLKDEEDSNAYSSLPSWKHEGIANESSVSQVTVNKEALKGHSRGADHIKQAVVDYVGSLLMPLYKARKLDKDGYKAIMKKSATKVMEQATDAEKAMTVRDFLDFKRRNKIRSFVDVLIERHMATKPGTKS* 1924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0677 1923 MobiDBLite consensus disorder prediction 1586 1601 - -
Mtr1g0677 1923 PANTHER FLAVIN MONOAMINE OXIDASE 540 1919 - -
Mtr1g0677 1923 MobiDBLite consensus disorder prediction 1529 1605 - -
Mtr1g0677 1923 MobiDBLite consensus disorder prediction 1004 1026 - -
Mtr1g0677 1923 MobiDBLite consensus disorder prediction 587 607 - -
Mtr1g0677 1923 MobiDBLite consensus disorder prediction 1783 1807 - -
Mtr1g0677 1923 Gene3D - 613 719 IPR036388 -
Mtr1g0677 1923 MobiDBLite consensus disorder prediction 160 187 - -
Mtr1g0677 1923 SUPERFAMILY Homeodomain-like 612 712 IPR009057 -
Mtr1g0677 1923 Coils Coil 1349 1376 - -
Mtr1g0677 1923 MobiDBLite consensus disorder prediction 1 31 - -
Mtr1g0677 1923 Pfam Flavin containing amine oxidoreductase 863 1333 IPR002937 GO:0016491
Mtr1g0677 1923 Gene3D - 961 1288 - -
Mtr1g0677 1923 SUPERFAMILY FAD/NAD(P)-binding domain 852 1336 IPR036188 -
Mtr1g0677 1923 Pfam SWIRM domain 627 704 IPR007526 GO:0005515
Mtr1g0677 1923 MobiDBLite consensus disorder prediction 135 187 - -
Mtr1g0677 1923 MobiDBLite consensus disorder prediction 50 97 - -
Mtr1g0677 1923 MobiDBLite consensus disorder prediction 1558 1573 - -
Mtr1g0677 1923 PRINTS Adrenodoxin reductase family signature 854 876 - -
Mtr1g0677 1923 PRINTS Adrenodoxin reductase family signature 877 890 - -
Mtr1g0677 1923 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1431 1515 IPR035441 -
Mtr1g0677 1923 SUPERFAMILY FAD-linked reductases, C-terminal domain 1171 1282 - -
Mtr1g0677 1923 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 540 1919 - -
Mtr1g0677 1923 Gene3D - 855 1331 IPR036188 -
Mtr1g0677 1923 MobiDBLite consensus disorder prediction 55 82 - -
Mtr1g0677 1923 ProSiteProfiles SWIRM domain profile. 614 714 IPR007526 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0677 Mtr-Chr1 7606149 7618339 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Mtr1g0677 Amino_oxidase 6.3e-108 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0677 1 7606149 7618339 Mtr1g0677 1 7606149 7618339 ECH