Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0666 ATGGCCCACCGTTTCCTCATCGCTCTCTTCCTCTTCGCCACCGTTGCAACCGCCGCAACAACCCTCTCCGACGACACAAACTCCGACGATCTTCTCATCCGACAAGTTGTCGACACCGCAGAAGATCACATACTAAACGCAGAGCATCACTTCACATCATTCAAGTCAAAGTTCAGCAAAAACTACGCAACAAAAGAAGAACACGATTACCGATTTGGTGTGTTCAAATCAAATCTTATCAAAGCGAAGCTTCACCAGAAGCTTGATCCTTCTGCGCAACACGGAATCACTAAATTCTCTGATTTAACGGCGTCTGAGTTCCGTCGTCAGTTTCTTGGACTTAACAAACGTCTCCGTTTGCCGGCTCACGCTCAGAAGGCTCCGATTCTTCCTACTAACAATCTTCCAGAGGATTTCGATTGGCGCGAGAAAGGTGCCGTCACTCCCGTCAAGGATCAGGGTTCTTGCGGTTCGTGTTGGGCGTTTAGTACTACTGGAGCTTTGGAAGGAGCAAACTATTTGGCGACTGGGAAGCTAACGAGTCTTAGTGAGCAACAGCTTGTGGACTGCGATCATGTGTGTGATCCAGAGGAACGTGGATCATGTGACTCTGGCTGTAACGGTGGATTGATGAACAACGCCTTCGAATACATACTCCAGTCTGGGGGAGTAGTGTCAGAAAAGGACTATGCTTACACCGGAAGAGATGGATCCTGCAAGTTTGACAAAAGCAAGGTTGTAGCTTCCGTATCTAACTTCAGCGTCGTTTCTCTAGACGAAGACCAAATTGCTGCAAATCTAGTAAAGAATGGCCCTCTTGCAGTTGCTATTAATGCAGCGTGGATGCAGACATATATGAGTGGTGTCTCATGCCCATACATCTGTGCCAAAGCACGTTTGGATCATGGGGTTCTTCTAGTTGGTTTTGGCCAAGGTGGCTATGCTCCCATTCGATTGAAGGAAAAACCTTACTGGATCATAAAGAATTCATGGGGCCAGAATTGGGGTGAGGAAGGATATTACAAGATCTGCAGAGGCCGAAATGTATGTGGAGTGGATTCCATGGTCTCCACTGTTGCTGCAGCTCAATCTTGA 1095 0.4749 MAHRFLIALFLFATVATAATTLSDDTNSDDLLIRQVVDTAEDHILNAEHHFTSFKSKFSKNYATKEEHDYRFGVFKSNLIKAKLHQKLDPSAQHGITKFSDLTASEFRRQFLGLNKRLRLPAHAQKAPILPTNNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGANYLATGKLTSLSEQQLVDCDHVCDPEERGSCDSGCNGGLMNNAFEYILQSGGVVSEKDYAYTGRDGSCKFDKSKVVASVSNFSVVSLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYICAKARLDHGVLLVGFGQGGYAPIRLKEKPYWIIKNSWGQNWGEEGYYKICRGRNVCGVDSMVSTVAAAQS* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0666 364 Pfam Cathepsin propeptide inhibitor domain (I29) 51 107 IPR013201 -
Mtr1g0666 364 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 324 343 IPR025661 -
Mtr1g0666 364 CDD Peptidase_C1A 136 359 IPR039417 -
Mtr1g0666 364 Gene3D Cysteine proteinases 21 360 - -
Mtr1g0666 364 SMART Inhibitor_I29_2 51 107 IPR013201 -
Mtr1g0666 364 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 153 164 IPR000169 -
Mtr1g0666 364 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 27 360 - -
Mtr1g0666 364 PRINTS Papain cysteine protease (C1) family signature 153 168 IPR000668 GO:0006508|GO:0008234
Mtr1g0666 364 PRINTS Papain cysteine protease (C1) family signature 302 312 IPR000668 GO:0006508|GO:0008234
Mtr1g0666 364 PRINTS Papain cysteine protease (C1) family signature 324 330 IPR000668 GO:0006508|GO:0008234
Mtr1g0666 364 Pfam Papain family cysteine protease 135 358 IPR000668 GO:0006508|GO:0008234
Mtr1g0666 364 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 300 310 IPR025660 -
Mtr1g0666 364 SUPERFAMILY Cysteine proteinases 47 358 IPR038765 -
Mtr1g0666 364 PANTHER CYSTEINE PROTEASE RD19C-RELATED 27 360 - -
Mtr1g0666 364 SMART pept_c1 135 360 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0666 Mtr-Chr1 7468730 7471668 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0666 1 7468730 7471668 Mtr1g0666 1 7468730 7471668 ECH