Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0660 ATGGAAACCAACTCAGTTTCCAAGCTTCTTCTGTTACTATTCTTCACTATCTTCTTTCTTGGTTCTGAGGTTATTCATTGTACTGTAACATATGATAGAAAAGCTATTATCATCAATGGCCAAAGGAGAATCCTCATCTCTGGTTCCATTCATTATCCAAGAAGCACCCCTGAAATGTGGGAGGATCTGATTCAAAAAGCAAAAGATGGAGGGTTAGATGTTATTGATACTTATGTGTTTTGGAATGTTCATGAACCTTCTCCTGGCAATTACAATTTTGAAGGAAGGTACGATCTAGTACAGTTCATTAAGACAGTGCAGAAAAAGGGTCTTTATGTACATCTTAGAATTGGACCTTATGTTTGTGCTGAGTGGAACTTTGGAGGATTTCCTGTTTGGTTGAAGTATGTTCCTGGGATCAGTTTCAGAACAGATAATGGTCCTTTTAAGGCTGCAATGCAAGGTTTTACACAGAAGATTGTTCAAATGATGAAGAATGAAAAGCTGTTTCAGTCACAAGGTGGTCCAATAATTCTTTCACAAATTGAGAATGAGTATGGCCCACAAGGAAGAGCACTTGGAGCTTCTGGTCATGCATACTCAAACTGGGCTGCAAAAATGGCTGTTGGATTAGGTACAGGTGTCCCTTGGGTGATGTGTAAGGAAGATGATGCCCCAGATCCAGTGATAAATGCTTGCAATGGTTTTTACTGTGATGATTTCTCTCCCAATAAACCATACAAGCCTAAACTATGGACTGAGTCTTGGAGTGGTTGGTTTTCAGAATTTGGTGGATCGAATCCCCAGCGACCAGTTGAGGATCTCGCGTTCGCAGTTGCTCGTTTCATACAAAAGGGTGGCTCGTTTTTTAATTATTACATGTACCACGGAGGAACTAATTTCGGACGATCGGCTGGAGGACCATTCATAACTACAAGCTATGACTATGATGCTCCAATTGATGAATATGGTTTGTTAAGAGAACCTAAATATGGTCATTTGAAGGACCTTCATAAAGCTATCAAGCAATGTGAACATGCCTTGGTTTCTTCAGATCCTACTGTTACATCATTAGGAGCATATGAACAGGCACATGTATTCTCTTCAGGAACAACCTGTGCAGCTTTTCTAGCAAACTATCATTCGAATTCGGCTGCAAGAGTGACCTTCAATAATAGGCACTATGACTTGCCTCCTTGGTCCATAAGTATCCTCCCTGATTGTAGAACAGATGTATTTAACACTGCAAGAATGAGGTTTCAACCTTCACAAATCCAAATGTTGCCTAGCAATTCTAAGTTGTTATCATGGGAGACCTATGATGAAGATGTATCTTCGCTAGCGGAAAGTTCTAGAATCACAGCTTCTAGACTTCTAGAACAGATAGATGCTACCAGAGACACTAGTGACTATCTATGGTATATAACAAGTGTTGACATAAGTTCATCTGAATCATTTCTTCGTGGAAGGAACAAACCAAGTATTAGTGTGCATTCCTCTGGTGATGCTGTTCATGTGTTTATCAATGGGAAATTTTCAGGCTCGGCTTTTGGGACAAGGGAAGACAGAAGTTTCACATTTAACGGCCCTATTGACCTACGTGCTGGAACTAACAAAATAGCACTTCTCAGTGTAGCTGTTGGATTGCCTAATGGTGGAATCCATTTTGAATCATGGAAGTCAGGAATCACAGGTCCAGTTTTGCTTCATGATCTTGACCATGGACAGAAGGATTTGACAGGGCAAAAATGGTCATACCAGGTTGGCCTAAAAGGTGAAGCTATGAATTTGGTGTCTCCCAATGGAGTCTCATCTGTTGACTGGGTGAGCGAGTCATTAGCTTCCCAAAACCAGCCACAGTTGAAATGGCACAAGGCTCATTTCAATGCACCTAATGGAGTTGAACCATTAGCATTGGACATGAGCAGTATGGGAAAGGGTCAAGTATGGATCAATGGACAAAGCATAGGAAGATATTGGATGGTTTATGCAAAGGGTAACTGTAATTCTTGCAACTATGCTGGAACTTATCGTCAAGCGAAATGCCAAGTTGGTTGTGGACAACCTACTCAAAGATGGTACCATGTTCCAAGGTCCTGGTTAAAACCAAAAAACAACTTGATGGTAGTTTTTGAGGAATTAGGAGGGAATCCTTGGAAAATATCTCTGGTGAAGAGGATAATACATACTCCAAGATCTAGTAAACCAAATTTAATGACTAATACAACACAAGGATGA 2238 0.4053 METNSVSKLLLLLFFTIFFLGSEVIHCTVTYDRKAIIINGQRRILISGSIHYPRSTPEMWEDLIQKAKDGGLDVIDTYVFWNVHEPSPGNYNFEGRYDLVQFIKTVQKKGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIILSQIENEYGPQGRALGASGHAYSNWAAKMAVGLGTGVPWVMCKEDDAPDPVINACNGFYCDDFSPNKPYKPKLWTESWSGWFSEFGGSNPQRPVEDLAFAVARFIQKGGSFFNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLLREPKYGHLKDLHKAIKQCEHALVSSDPTVTSLGAYEQAHVFSSGTTCAAFLANYHSNSAARVTFNNRHYDLPPWSISILPDCRTDVFNTARMRFQPSQIQMLPSNSKLLSWETYDEDVSSLAESSRITASRLLEQIDATRDTSDYLWYITSVDISSSESFLRGRNKPSISVHSSGDAVHVFINGKFSGSAFGTREDRSFTFNGPIDLRAGTNKIALLSVAVGLPNGGIHFESWKSGITGPVLLHDLDHGQKDLTGQKWSYQVGLKGEAMNLVSPNGVSSVDWVSESLASQNQPQLKWHKAHFNAPNGVEPLALDMSSMGKGQVWINGQSIGRYWMVYAKGNCNSCNYAGTYRQAKCQVGCGQPTQRWYHVPRSWLKPKNNLMVVFEELGGNPWKISLVKRIIHTPRSSKPNLMTNTTQG* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0660 745 Pfam Beta-sandwich domain in beta galactosidase 348 417 IPR041392 -
Mtr1g0660 745 PANTHER BETA-GALACTOSIDASE 3 732 - -
Mtr1g0660 745 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
Mtr1g0660 745 SUPERFAMILY Galactose-binding domain-like 583 730 IPR008979 -
Mtr1g0660 745 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Mtr1g0660 745 Gene3D Glycosidases 22 344 - -
Mtr1g0660 745 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Mtr1g0660 745 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Mtr1g0660 745 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Mtr1g0660 745 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Mtr1g0660 745 PRINTS Glycosyl hydrolase family 35 signature 251 266 IPR001944 GO:0004553|GO:0005975
Mtr1g0660 745 PRINTS Glycosyl hydrolase family 35 signature 288 303 IPR001944 GO:0004553|GO:0005975
Mtr1g0660 745 PRINTS Glycosyl hydrolase family 35 signature 308 324 IPR001944 GO:0004553|GO:0005975
Mtr1g0660 745 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Mtr1g0660 745 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Mtr1g0660 745 PANTHER BETA-GALACTOSIDASE RELATED 3 732 IPR001944 GO:0004553|GO:0005975
Mtr1g0660 745 SUPERFAMILY Galactose-binding domain-like 402 573 IPR008979 -
Mtr1g0660 745 Gene3D - 442 585 - -
Mtr1g0660 745 Gene3D - 595 732 - -
Mtr1g0660 745 Pfam Glycosyl hydrolases family 35 36 340 IPR031330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0660 Mtr-Chr1 7414430 7419487 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0660 1 7414430 7419487 Mtr8g2444 8 34897789 34903543 ECH
Mtr1g0660 1 7414430 7419487 Mtr1g0660 1 7414430 7419487 ECH
Mtr1g0660 1 7414430 7419487 Mtr3g4221 3 56066124 56072131 PCT