Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0653 ATGATGAGATGTGCATGCGTTAACGGTGGTTCCGTTATTCTTCAACCATCATCATCTTCTTCAACAATTCGATTTCAATTTCAACAACAACAACGTTATCTAAATCTTGTTCGTTCTCATTCCTTATCCTCTTTCTCTCTTAACGTTACACCGCACAACACTGAACAACTTCAACTCTCTTCTTCTTTCTCCAACGACGCGGTTTTACTTCCAATTCAAGAACAAGAACAACAACAATCATCTCCTCCAACTCCAGATGAAGATAAATCCACTACCAAGCTTAAAAAGAAGAAGAAAGATAAAAACGACGATGATAACAGTAGCAACATCGATAACCGCTTCAAGCTCCGTAACGGAAGAGAGGTTTTTGAAGAGAAAGCGTATCTGGTTGGTGTCGAGAGAAAAGGCGAAGTTAGTGATTCATTTGGTATAGAAGATTCTTTGAGTGAATTGGAACAGTTAGCTGATACTGCTGGATTATTGGTTGTTGCCTCTACATACCAAAAGCTTGCTTCTCCAAACCCTAGGACGTACATTGGCTCTGGTAAAGTTTCTGAAATTAAGAGTGCAATTAATGCATTGGACGTTGAAACTGTGATATTTGATGATGAGCTATCAGCTGGGCAACTGCGCAACCTGGAAAAGGTTTTTGGTGGAGATGTGAGAGTTTGCGATCGAACTGCTCTAATCCTTGATATATTTAATCAGCGAGCGGCAACACATGAAGCATCTTTACAGGTTGCATTAGCACAAATGGAATACCAACTACCTCGTCTAACAAAAATGTGGACTCATCTTGAGCGTCAATCAGGAGGGCAGGTGAAGGGAATGGGTGAAAAACAAATAGAAGTGGACAAGCGTATTTTGCGTAACCAAATCGGTGTTCTGAAAAAGGAGCTAGAATCTGTTAGGAAGCACCGAAAGCAGTACCGTAACAGGCGTCTCTCAGTACCTGTGCCTGTAGTATCCTTGGTTGGTTATACGAATGCTGGTAAGAGTACGCTTTTGAATCAATTAACTGGAGCAGATGTTCTTGCCGAGGATAAACTATTTGCAACTTTAGATCCAACTACAAGGAGAGTACAGATGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAGTTACCTACTACACTAGTTGCTGCCTTCAGAGCCACACTGGAGGAGATATCAGAGTCATCACTTTTGGTGCATGTGATTGATATCAGTCACCCCCTGGCCGACCAACAGATAAATGCTGTGGACAAAGTTCTGTCAGAACTAGATGTATCATCAATCCCAACGCTGATGGTCTGGAACAAGATCGACAGGGCTAGTGATCCCCAGAAAATCAGGCTAGAAGCTGGAAAAAGAGATGATGTTGTATGCATATCTGCCTTAAGTGGCGATGGCATACAAGAATTCTGTAATGCAGTTCAAGACAAACTAAAGGACTCCATGGTATGGGTGGAAGCTTTGTTACCATTTGAAAATGGGGACCTTCTCAGCACCATACACCAAGTTGGAATGGTTGAGAAAACTGAATATACCGAGCAAGGGACATATATCAAGGCTCATGTGCCCCTACGTTTTGCGAGGTTGCTCACACCGATGAGGCAACTGTGTGTACCACGACCTTAA 1638 0.4219 MMRCACVNGGSVILQPSSSSSTIRFQFQQQQRYLNLVRSHSLSSFSLNVTPHNTEQLQLSSSFSNDAVLLPIQEQEQQQSSPPTPDEDKSTTKLKKKKKDKNDDDNSSNIDNRFKLRNGREVFEEKAYLVGVERKGEVSDSFGIEDSLSELEQLADTAGLLVVASTYQKLASPNPRTYIGSGKVSEIKSAINALDVETVIFDDELSAGQLRNLEKVFGGDVRVCDRTALILDIFNQRAATHEASLQVALAQMEYQLPRLTKMWTHLERQSGGQVKGMGEKQIEVDKRILRNQIGVLKKELESVRKHRKQYRNRRLSVPVPVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVIDISHPLADQQINAVDKVLSELDVSSIPTLMVWNKIDRASDPQKIRLEAGKRDDVVCISALSGDGIQEFCNAVQDKLKDSMVWVEALLPFENGDLLSTIHQVGMVEKTEYTEQGTYIKAHVPLRFARLLTPMRQLCVPRP* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0653 545 MobiDBLite consensus disorder prediction 73 87 - -
Mtr1g0653 545 Pfam HflX C-terminal domain 452 520 IPR045498 -
Mtr1g0653 545 Gene3D - 238 305 - -
Mtr1g0653 545 Hamap GTPase HflX [hflX]. 148 511 IPR016496 GO:0005525
Mtr1g0653 545 PANTHER GTP-BINDING PROTEIN HFLX 93 530 IPR016496 GO:0005525
Mtr1g0653 545 TIGRFAM small_GTP: small GTP-binding protein domain 321 477 IPR005225 GO:0005525
Mtr1g0653 545 Gene3D - 319 487 IPR027417 -
Mtr1g0653 545 MobiDBLite consensus disorder prediction 73 113 - -
Mtr1g0653 545 Pfam GTP-binding GTPase N-terminal 145 234 IPR025121 -
Mtr1g0653 545 TIGRFAM GTP_HflX: GTP-binding protein HflX 127 481 IPR016496 GO:0005525
Mtr1g0653 545 CDD HflX 279 482 IPR030394 GO:0005525
Mtr1g0653 545 Coils Coil 293 313 - -
Mtr1g0653 545 Pfam GTP-binding GTPase Middle Region 237 314 IPR032305 -
Mtr1g0653 545 PRINTS GTP1/OBG GTP-binding protein family signature 322 342 IPR006073 GO:0005525
Mtr1g0653 545 PRINTS GTP1/OBG GTP-binding protein family signature 389 407 IPR006073 GO:0005525
Mtr1g0653 545 PANTHER GTP-BINDING PROTEIN 6-RELATED 93 530 - -
Mtr1g0653 545 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 320 493 IPR027417 -
Mtr1g0653 545 Pfam 50S ribosome-binding GTPase 322 440 IPR006073 GO:0005525
Mtr1g0653 545 MobiDBLite consensus disorder prediction 88 113 - -
Mtr1g0653 545 Gene3D - 139 237 IPR042108 -
Mtr1g0653 545 ProSiteProfiles HflX-type guanine nucleotide-binding (G) domain profile. 320 486 IPR030394 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0653 Mtr-Chr1 7339517 7346074 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0653 1 7339517 7346074 Mtr1g0653 1 7339517 7346074 ECH