Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0647 ATGGCCACATCTAGTGGAAACTCTAGTGTGTCAACAAAATCTCAAAGCTATGGCTCTGAGGAAGATTTGCAGCTTCTAATGGATCAAAGAAAAAGGAAGAGAAAGCAATCGAACCGCGAATCGGCAAGAAGATCAAGGATGAGGAAGCAGAAGCACATGGATGATTTAATTGCTGAAGTTGAAAGACTAAGAAATGAAAACAGTGAAATACTCACAAGGATGAACATGACAACACAACACTATCTTAAAATTGAGGCAGAGAATTGTGTTCTAAGGGCTCAAATGTGTGAACTTAATCAAAGGCTACAATCATTGAATGATATCATCAACCTCATCAACATAACAACTACTACTAATGGAGTTAATTATCAAAATAATGATTGTTTTTTAACAATTTCAGATAATTGCTTCATGAATCAAATGAATATGTCATATCTTAATCAACAACCAATTATGGCCTCTGCAGACATGTTTATGTGGTGA 483 0.352 MATSSGNSSVSTKSQSYGSEEDLQLLMDQRKRKRKQSNRESARRSRMRKQKHMDDLIAEVERLRNENSEILTRMNMTTQHYLKIEAENCVLRAQMCELNQRLQSLNDIINLINITTTTNGVNYQNNDCFLTISDNCFMNQMNMSYLNQQPIMASADMFMW* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0647 160 Gene3D - 28 83 - -
Mtr1g0647 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 158 - -
Mtr1g0647 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Mtr1g0647 160 Coils Coil 46 73 - -
Mtr1g0647 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Mtr1g0647 160 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Mtr1g0647 160 MobiDBLite consensus disorder prediction 1 22 - -
Mtr1g0647 160 MobiDBLite consensus disorder prediction 1 54 - -
Mtr1g0647 160 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Mtr1g0647 160 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Mtr1g0647 160 Pfam bZIP transcription factor 30 85 IPR004827 GO:0003700|GO:0006355
Mtr1g0647 160 PANTHER BZIP TRANSCRIPTION FACTOR 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0647 Mtr-Chr1 7305450 7306853 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr1g0647 bZIP_1 5.2e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0647 1 7305450 7306853 Mtr1g0647 1 7305450 7306853 ECH