Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0623 ATGAGTAGTTTGAGGAATGAGAATGAAGAAGGAAGGGATCTTAAGAAGCCATTTCTACACACAGGAAGTTGGTTCAAAATCAATGAAAGAAAACAATCAAGTTTGTTTGGGTCAACTCAAGCCATTCGTGACTCTTCCATCTCTGTCATTGCTTGTGTTCTCATTGTTGCTTTGGGTCCTATTCAGTTTGGTTTTACAGCAGGTTATACTTCACCTACACAATCAGCTATCATCACTGATCTTGGCCTCTCAGTTTCTGAGTTCTCTTTGTTTGGTTCTTTGTCCAATGTGGGTGCTATGGTTGGAGCAATAGCCAGTGGTCAAATTGCTGAGTATATGGGGCGCAAAGGGTCTTTGATGATTGCATCCATTCCCAATATTATTGGTTGGTTGATGATCTCATTTGCAAATGATTCTTCTTTTCTCTATATGGGAAGGTTGTTGGAAGGATTTGGCGTCGGAATAATATCTTACACGGTGCCAGTGTATATAGCTGAGATATCACCTCAAAACTTGAGGGGAAGTCTGGTTTCGGTTAACCAGCTTTCTGTCACCCTTGGAATTATGCTGGCTTATCTGCTAGGACTTTTTGTTGAATGGAGATTCCTTGCAATTTTAGGAATTATACCCTGCACATTATTAATACCTGGTTTATTCTTCATTCCTGAGTCTCCAAGATGGCTAGCAAAAATGGGCATGACAGAAGAATTTGAAAATTCCTTGCAAGTGCTCAGAGGTTTTGAAACTGATATTTCGGTTGAAGTTAATGAAATTAAGACCGCTGTTGCATCGGCAAATAGAAGAACTACCGTTCGATTTTCAGAACTCAAGCAAAGAAGATATTGGCTTCCATTAATGATCGGAATTGGCCTGCTTGTTTTGCAACAGCTTTCTGGGATAAATGGTGTTCTTTTTTATTCCAGTACCATCTTTCAAAATGCTGGAATTAGTTCGAGTGACGTAGCTACATTTGGAGTTGGTGCTGTTCAGGTTCTTGCCACCACTTTAACTTTGTGGTTGGCAGACAAATCCGGTCGTCGGCTCCTACTTATTGTTTCTTCATCAGCAATGACTTTAAGTCTTTTGGTTGTGTCGATCTCATTCTACTTGAAGGATTATTATATATCAGCAGATTCTTCTTTATATGGGATATTGAGCCTCTTATCGGTGGCCGGAGTTGTGGTCATGGTTATTGCATTCTCTTTGGGAATGGGAGCTATGCCATGGATTATAATGTCTGAGATTCTTCCGATTAACATCAAAGGCCTTGCCGGAAGTTTTGCAACACTTGCCAATTGGTTCTTTTCGTGGTTGATTACATTGACAGCAAATTTGCTCTTGGATTGGAGTTCTGGAGGAACCTTCACTATATATACAGTTGTATGTGCTTTCACAGTAGGATTTGTTGCTATTTGGGTCCCTGAGACAAAGGGAAAAACTCTTGAAGAAATCCAACAATTTTTCAGATGA 1470 0.4 MSSLRNENEEGRDLKKPFLHTGSWFKINERKQSSLFGSTQAIRDSSISVIACVLIVALGPIQFGFTAGYTSPTQSAIITDLGLSVSEFSLFGSLSNVGAMVGAIASGQIAEYMGRKGSLMIASIPNIIGWLMISFANDSSFLYMGRLLEGFGVGIISYTVPVYIAEISPQNLRGSLVSVNQLSVTLGIMLAYLLGLFVEWRFLAILGIIPCTLLIPGLFFIPESPRWLAKMGMTEEFENSLQVLRGFETDISVEVNEIKTAVASANRRTTVRFSELKQRRYWLPLMIGIGLLVLQQLSGINGVLFYSSTIFQNAGISSSDVATFGVGAVQVLATTLTLWLADKSGRRLLLIVSSSAMTLSLLVVSISFYLKDYYISADSSLYGILSLLSVAGVVVMVIAFSLGMGAMPWIIMSEILPINIKGLAGSFATLANWFFSWLITLTANLLLDWSSGGTFTIYTVVCAFTVGFVAIWVPETKGKTLEEIQQFFR* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0623 489 TIGRFAM SP: MFS transporter, sugar porter (SP) family 36 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr1g0623 489 CDD MFS_GLUT6_8_Class3_like 50 483 IPR044775 GO:0008643|GO:0051119
Mtr1g0623 489 PRINTS Sugar transporter signature 60 70 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr1g0623 489 PRINTS Sugar transporter signature 143 162 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr1g0623 489 PRINTS Sugar transporter signature 295 305 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr1g0623 489 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr1g0623 489 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr1g0623 489 Pfam Sugar (and other) transporter 53 488 IPR005828 GO:0016021|GO:0022857|GO:0055085
Mtr1g0623 489 PANTHER - 15 487 - -
Mtr1g0623 489 PANTHER SUGAR TRANSPORTER ERD6-LIKE 6 15 487 - -
Mtr1g0623 489 ProSitePatterns Sugar transport proteins signature 2. 148 173 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr1g0623 489 Gene3D MFS general substrate transporter like domains 42 489 IPR036259 -
Mtr1g0623 489 ProSiteProfiles Major facilitator superfamily (MFS) profile. 52 477 IPR020846 GO:0022857
Mtr1g0623 489 ProSitePatterns Sugar transport proteins signature 1. 106 123 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr1g0623 489 SUPERFAMILY MFS general substrate transporter 50 485 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0623 Mtr-Chr1 7114701 7118942 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0623 1 7114701 7118942 Mtr1g0623 1 7114701 7118942 ECH