Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0620 ATGTCCTCAAGTTCAGCTTGGACAACAAAGCAGAACAAAAGATTTGAGAATGCTTTGGCCATCTATGACAAGGACACCCCAGATAGGTGGCAGAAGCTAGCAAGGGCTGTTGGAGGGAAGACAGTTGAGGAAGTGAAAAGGCATTATGAGATGTTAGTTGAAGATTTGAAGCAAATTGAGGAAGGTCATGTTCCTTTGCCCAAATACAGAAATGCTGCAACAATTAAAGGTTACAATTACAGTGACGAAGAACAAAGGTTGAAATATCTAAGCCTTCAGTGA 282 0.4113 MSSSSAWTTKQNKRFENALAIYDKDTPDRWQKLARAVGGKTVEEVKRHYEMLVEDLKQIEEGHVPLPKYRNAATIKGYNYSDEEQRLKYLSLQ* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0620 93 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Mtr1g0620 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 93 - -
Mtr1g0620 93 Pfam Myb-like DNA-binding domain 5 52 IPR001005 -
Mtr1g0620 93 SMART sant 3 55 IPR001005 -
Mtr1g0620 93 SUPERFAMILY Homeodomain-like 7 60 IPR009057 -
Mtr1g0620 93 CDD SANT 6 53 IPR001005 -
Mtr1g0620 93 Coils Coil 42 62 - -
Mtr1g0620 93 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Mtr1g0620 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 93 IPR044636 GO:0003700
Mtr1g0620 93 Gene3D - 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0620 Mtr-Chr1 7093775 7094948 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr1g0620 Myb_DNA-binding 5.9e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0620 1 7093775 7094948 Mtr1g0620 1 7093775 7094948 ECH
Mtr1g0620 1 7093775 7094948 Mtr3g4186 3 55779071 55780028 PCT