Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0618 ATGAAAATGAAGAGTGGAATAACAGTGAGTGTTGTTATGGTATTGTTTTTGTTAGTAGAGTTAACAGTGAGTTTGAGTTCAAGAACTGAATGGTCAGCGTTATTGGAGCTTCGTTCATCGATGGGGATAAGGGGGAAGGAGTGGCCTAAAAAAACTGATCCATGTCGGAACTGGACCGGTGTTGAGTGCCGGAACGATCAAGTTGTTGGTATCAAAGTGGCTGGGTTGAATAGAACCCACAAAGGTCGTCTTAACCCGAGTTTTGAAGTTGATGCTCTTGCAAATTTCACACTATTGGAGTCTTTCAATGCTTCTGGGTTCATGCTCAATGGTTCTATTCCTGAGTGGTTTGGTGAGAAGCTTGGTGCACTAAAAGAGCTTGATTTAAGGTCTTGTTCAATATCTGGTGTGATTCCTGGTTCACTTGGGGGCATGAGAAGTTTGAAGAAGTTGTTTCTTTCAAGGAACAATCTTACTAGTAGAGTGCCTTCAGGTTTGGGGTTGTTATCTAATCTTTCTATTCTTGATCTCTCTAGGAATTTGCTTTCAGGATCAGTACCTGAATCTTTCTCTAAGCTCGGTAACATTACAAGGCTTGATCTTTCAAATAATTATTTATCTGGCTCTATTCCACCTGAACTAGGTACCCTTTCAAATCTTCAAAATTTGAACCTTTCTAACAATTCTTTCACTTCTTCGCTTCCCTCTCAGCTAGGTAATCTTTCAAAGTTGGTTGAACTCGATCTTAGTATGAATTCTCTTTCTGGGCCGTTGCCGGGTAGTTTGTTGTCAATGCCTAAGTTGCTAATATTTGATGTATCAGAAAACAGTCTCACTGATCCACTACCAAAATTGTCTGGTTTAAATGTTAGCTCAGGTGGCATATTCAATCTATCAAACAATTTGTTTTATGGACCTGTGAATGGTTTTATGAACAAGATTAAAACGATTGATTTGTCCAGTAATTATCTGGAAGGTGATGTGCAAGGTGATGGTGGTAGTCTTAGTGATGTTGCTTTAGCCAGAAATTGCCTACAGATGATTTCAAACCAGAGAAATTTGGAAGAGTGTAGAATGTTTTATGTCCAGAGAAATTTAACCTTTGCTTCTGGTGGCCATGAGTCCAAGAAAAACAAACGATTGATATTCATACTGGCAGGTATATTTGGTGGGTTTGGCTTTATTGTGCTACTGGTACTGGTCCTCATATTGGTTCTGAAACAATGTCATAAGAGTAAAAATTTGGAAATTGAAAGAGGGACCACAAATGGGGGGCCTGTTACAGAAGGGGAAAGTCCTATACCTAAGGATCCCGTTTTTGTAACTGCCGTGGGAGAGTCATTTACTTTTGAACAAATTCTCCATATGACTGGCAATTTTGACGAAGCAAACTTAATAAAGCATGGTCATTCTGGAGACTTTTTCTGGGGAGTTTTGGACAATGGAGCAACAGTTGTTGTCAAAAGGGTAGATTTAAGCTTATTTAAGAGAGAATCTTACATGGTAGAATTGGGATTATTGAGCAAGGTTTCACATGCAAGATTGGTCCCAATCCTAGGACACTGCATGGACAATGAGAAGGATAAATGTATAGTTTACAAGTATATGTTAAATGGAGATTTGGCTACTTCCTTGCACAAAGTCCATGATTCAGATGGAAAATTGCAGTCCATGGATTGGATCACAAGATTGAAAATTGCAACAGGAGTTGCTGAAGGCCTAGCTTACCTACATGATTGCAGCCCTCCCCTTGTTCACAGAGATATCCGAGCTAGTAGTATACTTCTTGATGATAAATTTGAAGTGCGACTTGGAAGTTTAAGTGAGGTCATTGCCCAAGGGGATCTTCATCAGAATGCTGTGTCAAGAGTTTTCAGCAAGCCAATGTCTTCTAATCAAGGCAATTCTGGTAAATCATCTGTAACATGGGCCTATGATGTCTACTGTTTTGGGAAGATTTTACTCGAGCTTGTTACCGGTAATATTGACATCAGCAAATCAGATGATGCCACGACAAAGGATTGGTTAGAGCACACCTTGTGCTACATCACCATATTCGATAAAGAACGATTGACTAAGATTGTTGACCCGACTTTGATAGTGGATGAGGACCTATTGGAAGAGGTATGGGCTATGGCAATTGTGGCCAAGTCATGCCTGAATCCTAAGCCTTCCAAACGTCCTCCAATGAGACATGTCCTCAAAGCACTTGAAAATCCATTGAAGATTGTTAGAGAAGAAAGTTTTAGTTCAGCAAAACTGAGAACAACTTCATCTAATAGATCTTGGAGCACTGCATTCTTTGGTAGCTGGAGACACAGTTCATCAGACAGTGGCGCTACCATAACACATACAAATAGGGAGGGTTCTAGTGGCAATAAACAAACAGGAAGAGTAGGTTCTCATGGTAGTGGTGGCAATGATCACTCTTCTTCCAATAAAAGGTCATCCAATGAAGTTTTCCCTGAACCGTTGGGAATGCAAGACGTGGAGAGTGGAGAGGCAAAGTGA 2511 0.4026 MKMKSGITVSVVMVLFLLVELTVSLSSRTEWSALLELRSSMGIRGKEWPKKTDPCRNWTGVECRNDQVVGIKVAGLNRTHKGRLNPSFEVDALANFTLLESFNASGFMLNGSIPEWFGEKLGALKELDLRSCSISGVIPGSLGGMRSLKKLFLSRNNLTSRVPSGLGLLSNLSILDLSRNLLSGSVPESFSKLGNITRLDLSNNYLSGSIPPELGTLSNLQNLNLSNNSFTSSLPSQLGNLSKLVELDLSMNSLSGPLPGSLLSMPKLLIFDVSENSLTDPLPKLSGLNVSSGGIFNLSNNLFYGPVNGFMNKIKTIDLSSNYLEGDVQGDGGSLSDVALARNCLQMISNQRNLEECRMFYVQRNLTFASGGHESKKNKRLIFILAGIFGGFGFIVLLVLVLILVLKQCHKSKNLEIERGTTNGGPVTEGESPIPKDPVFVTAVGESFTFEQILHMTGNFDEANLIKHGHSGDFFWGVLDNGATVVVKRVDLSLFKRESYMVELGLLSKVSHARLVPILGHCMDNEKDKCIVYKYMLNGDLATSLHKVHDSDGKLQSMDWITRLKIATGVAEGLAYLHDCSPPLVHRDIRASSILLDDKFEVRLGSLSEVIAQGDLHQNAVSRVFSKPMSSNQGNSGKSSVTWAYDVYCFGKILLELVTGNIDISKSDDATTKDWLEHTLCYITIFDKERLTKIVDPTLIVDEDLLEEVWAMAIVAKSCLNPKPSKRPPMRHVLKALENPLKIVREESFSSAKLRTTSSNRSWSTAFFGSWRHSSSDSGATITHTNREGSSGNKQTGRVGSHGSGGNDHSSSNKRSSNEVFPEPLGMQDVESGEAK* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0618 836 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Mtr1g0618 836 SUPERFAMILY L domain-like 54 327 - -
Mtr1g0618 836 Pfam Protein tyrosine and serine/threonine kinase 467 736 IPR001245 GO:0004672|GO:0006468
Mtr1g0618 836 MobiDBLite consensus disorder prediction 772 819 - -
Mtr1g0618 836 Pfam Leucine rich repeat N-terminal domain 32 63 IPR013210 -
Mtr1g0618 836 Gene3D Phosphorylase Kinase; domain 1 435 535 - -
Mtr1g0618 836 Gene3D Ribonuclease Inhibitor 190 372 IPR032675 -
Mtr1g0618 836 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 266 791 - -
Mtr1g0618 836 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 17 265 - -
Mtr1g0618 836 PANTHER RECEPTOR-LIKE PROTEIN 55 266 791 - -
Mtr1g0618 836 PANTHER RECEPTOR-LIKE PROTEIN 55 17 265 - -
Mtr1g0618 836 SMART LRR_typ_2 193 215 IPR003591 -
Mtr1g0618 836 SMART LRR_typ_2 145 168 IPR003591 -
Mtr1g0618 836 SMART LRR_typ_2 121 144 IPR003591 -
Mtr1g0618 836 SMART LRR_typ_2 169 192 IPR003591 -
Mtr1g0618 836 SMART LRR_typ_2 241 264 IPR003591 -
Mtr1g0618 836 SMART LRR_typ_2 217 240 IPR003591 -
Mtr1g0618 836 SMART LRR_typ_2 282 305 IPR003591 -
Mtr1g0618 836 MobiDBLite consensus disorder prediction 772 836 - -
Mtr1g0618 836 Gene3D Transferase(Phosphotransferase) domain 1 536 759 - -
Mtr1g0618 836 ProSiteProfiles Protein kinase domain profile. 460 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0618 836 SUPERFAMILY Protein kinase-like (PK-like) 444 737 IPR011009 -
Mtr1g0618 836 Pfam Leucine rich repeat 114 158 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0618 Mtr-Chr1 7060181 7065006 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Mtr1g0618 PK_Tyr_Ser-Thr 1.4e-22 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0618 1 7060181 7065006 Mtr1g0618 1 7060181 7065006 ECH