LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr1g0616	ATGGCTATTATACCTCGTCAAGCTAAAAGACCAACTGGGTTATGGGTGAAGATGACAGCTGTAACAATTTTGGGTCTATGTTTTATTTTTGTTTGGACTGTGTTTTCTTCTTCATCTTCTTCTGTTAGTTTTCAAAGGGAAAGTTTTGAAGATATTTCAGAACCTGTTTCTTCTTCTTCTTCCAATGTTCAAAAACAAACACCAAAATCAGAAAAACGTGTGGAAGTGGAGAAAGATCATAAATTTCATAAGAGTGATGAGAAAAAGGTTGATGGGTCATCTTCAAATTCTTCTTCCATGCGCCCTCATAAGAAAGAAGTGGCGCGTGAAAAGAAACGTGTGCATAAGAAGGACGATAATAAAGAGAATGTGAATCAAGGGTCATTGGAGAAAGAGGAAGAAGGTGAAAAAGAGTTGGAAGATAAAGAAGAAGGATTGGATCATGAGAGTGAAGTTGATTTGGATTCTGATGTTGTTGGTGGTGATGATTCAGCTGAATCTGTTGATGAAGATTCTGAGATATCGGAAGAGTTAAAGAAAACAAAGAAGGGAAAAGTGAAAGGACCTTTGTTTGAATCAAATGTTAACTATAGATGGAAAATGTGCAATACTAGAAGCAAGCATAACTATATTCCTTGCATTGATATTGAAGTAGGTGGTGGAAAGGTGCAGTACCGGCATACGGAGAGGAGTTGTCCGAGGATGCCCTTCACGTGTATGGTTCCCCTTCCTCTTGAAGGGTATGATTCTCCGGTGCCGTGGCCTGAGAGCAAAATGAAGATATTGTATAAGAATGTTGCACACCCGAAACTAGCTGCATATATAAAAAAACATCGTTGGTTGGTGGATTCTGGAGAATATCTTACTTTCCCTCAAAACCAGTCAGAATTTTTGGGAGGGATTCAGCACTATCTTGAGTCAATTGAAGAGATGGTACCAGACATTGAGTGGGGTAAAAATATTCGTGTTGTCCTGGACATTGGATGTACAGATTCAAGCTTCGCAGCTGCTCTCTTTGATAAGGATGTTTTAACATTGTCACTTGGCTTGAAAGATGACCTAGTGGACTTAGCTCAAGTGGCACTCGAGCGCGGCTTCCCAACATTGGTTAGCCCTTTTGCTAGAAGGAGACTTCCTTTTCCAAGTCAAGTTTTTGATGCTATAAACTGTGCCCGTTGCAGCATACCTTGGCATTCCAATGGGGGTAAACTTCTACTGGAGATGAATCGGATTCTAAGACCTGGTGGATACTTTATCATGTCAACTAAACATGACAGCATTGAAGAAGAAGAAGCCATGACTGCACTGACAGCATCTATTTGTTGGAATGTTTTGGCACATAAAAGTGATGATGTTGGTGAAGTTGGAGTTAGAATATATCAAAAGCCTGAAGGAAATGACATATATGAATTGAGAAGAAAGAAGATCCCACCGATTTGCAAAGAAAATGAAAATCCCGATGCAGTCTGGCATGTTCCAATCAAGACTTGTTTGCACACCATTCCAATTGGAATTGAAAAACATGGGGCAGAGTGGCCTGAGGAATGGCCGAAGAGGCTCGAAACTTATCCCGACTGGATGAACAATAAAGAGAAATTGATTGCAGACACCAACCATTGGAATGCCATTGTTAACAAGTCGTATCTCAATGGAATGGGCATCAACTGGACAAGTATCAGGAATGTAATGGACATGAAATCCATCTATGGAGGATTAGCTGCAGCTCTATCTAAACATAACGTTTGGGTCATGAATGTAGTACCTGTTCATGCACCGGATACGCTTCCCATAATTTTTGAACGGGGATTTTTTGGCGTCTATCATGATTGGTGCGAGTCTTTTGGTACTTATCCAAGAACTTATGACCTTCTGCATGCTGATCATTTGTTCTCACGCCTCAAAAACAGGTGCAAGCAACCTGTGTCGATTGTTGTTGAGATGGACCGTATCTTACGGCCAGGAGGTTTGACAATCATACGTGATAAAGTTGAAATCCTAAATGCATTGGAGGAAATATTGAGAAGTATGCAATGGGAAATCAGAATGACTTTCTACCAGGAAAAAGAGGGTATCTTATGTGCACAGAAAACTCTATGGAGGCCTTAA	2106	0.4041	MAIIPRQAKRPTGLWVKMTAVTILGLCFIFVWTVFSSSSSSVSFQRESFEDISEPVSSSSSNVQKQTPKSEKRVEVEKDHKFHKSDEKKVDGSSSNSSSMRPHKKEVAREKKRVHKKDDNKENVNQGSLEKEEEGEKELEDKEEGLDHESEVDLDSDVVGGDDSAESVDEDSEISEELKKTKKGKVKGPLFESNVNYRWKMCNTRSKHNYIPCIDIEVGGGKVQYRHTERSCPRMPFTCMVPLPLEGYDSPVPWPESKMKILYKNVAHPKLAAYIKKHRWLVDSGEYLTFPQNQSEFLGGIQHYLESIEEMVPDIEWGKNIRVVLDIGCTDSSFAAALFDKDVLTLSLGLKDDLVDLAQVALERGFPTLVSPFARRRLPFPSQVFDAINCARCSIPWHSNGGKLLLEMNRILRPGGYFIMSTKHDSIEEEEAMTALTASICWNVLAHKSDDVGEVGVRIYQKPEGNDIYELRRKKIPPICKENENPDAVWHVPIKTCLHTIPIGIEKHGAEWPEEWPKRLETYPDWMNNKEKLIADTNHWNAIVNKSYLNGMGINWTSIRNVMDMKSIYGGLAAALSKHNVWVMNVVPVHAPDTLPIIFERGFFGVYHDWCESFGTYPRTYDLLHADHLFSRLKNRCKQPVSIVVEMDRILRPGGLTIIRDKVEILNALEEILRSMQWEIRMTFYQEKEGILCAQKTLWRP*	702

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr1g0616	701	PANTHER	METHYLTRANSFERASE PMT28-RELATED	7	701	-	-
	Mtr1g0616	701	MobiDBLite	consensus disorder prediction	51	67	-	-
	Mtr1g0616	701	MobiDBLite	consensus disorder prediction	136	172	-	-
	Mtr1g0616	701	MobiDBLite	consensus disorder prediction	51	180	-	-
	Mtr1g0616	701	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	555	686	IPR029063	-
	Mtr1g0616	701	CDD	AdoMet_MTases	324	421	-	-
	Mtr1g0616	701	PANTHER	SAM-DEPENDENT METHYLTRANSFERASE	7	701	IPR004159	GO:0008168
	Mtr1g0616	701	Gene3D	Vaccinia Virus protein VP39	300	469	IPR029063	-
	Mtr1g0616	701	Pfam	Putative S-adenosyl-L-methionine-dependent methyltransferase	209	696	IPR004159	GO:0008168
	Mtr1g0616	701	MobiDBLite	consensus disorder prediction	68	91	-	-
	Mtr1g0616	701	MobiDBLite	consensus disorder prediction	112	135	-	-
	Mtr1g0616	701	Coils	Coil	129	149	-	-
	Mtr1g0616	701	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	231	426	IPR029063	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr1g0616	Mtr-Chr1	7043464	7048895	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr1g0616	1	7043464	7048895	Mtr1g0616	1	7043464	7048895	ECH