Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0590 ATGGCTTCCGACAGAGAAACTTCAACAAAAAAAATTCGGAGGAAGCCATCGTGGAAGGAGAAAGAGAAAAATATGATGAGAGAAAGAAGAAGGAGAGCCATAACAACAAAGATATTCGATGGACTTCGAACTCAAGGGAGCTACAATTTATCGAAGCATCGTGACAACAACGAGGTCCTCAAAGCTCTTTGTGCAGAAGCTGGTTGGTCGGTCGAAGAAGATGGAACCACCTATCGCAAGGGTTACAATCCTCCACTAAACAATGATGCAGGCACCTCTTTCTCTCATTCCCAAAATCCATGTCTCATTTGTCCATCTTTTCCAACTTCAATTCCTTCATACCAATTCACTCCTCAGCCTTTTCCTCCTTTGTGGATATCAAACAGTGCTCCTGTTACACCTCCTCTCTACTCACCAACATCAACAAACCTTACACCAATTCCAGCATGGGACTCCATTTCCAAAGAATCTATGGCCTTTTTTAGTTACCCTTTTGTTGCATCTTCTACCCCTGCTAGCCCAACACACCAAAACCTTCATACCCCAATGAAGTTCCATCCTTTTGCACAATCTCCATTTGCAGTGCCAACTTCTTCATCTTTCAATGCTGTGGCTGATAACTCATTCAGCGAGAAGACAAGTTCAAAAATGCTTGGGGTGCAAGTAAAGCCTTGGGTTGGTGAAAAAATTCATGATGAGGGATTGGATGATTTGGAACTCACTCTTGGAACTGGGAAAGGAAGGATATAG 750 0.4293 MASDRETSTKKIRRKPSWKEKEKNMMRERRRRAITTKIFDGLRTQGSYNLSKHRDNNEVLKALCAEAGWSVEEDGTTYRKGYNPPLNNDAGTSFSHSQNPCLICPSFPTSIPSYQFTPQPFPPLWISNSAPVTPPLYSPTSTNLTPIPAWDSISKESMAFFSYPFVASSTPASPTHQNLHTPMKFHPFAQSPFAVPTSSSFNAVADNSFSEKTSSKMLGVQVKPWVGEKIHDEGLDDLELTLGTGKGRI* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0590 249 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 183 248 - -
Mtr1g0590 249 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 119 - -
Mtr1g0590 249 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 118 183 - -
Mtr1g0590 249 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 118 IPR008540 -
Mtr1g0590 249 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 119 IPR033264 GO:0003700|GO:0006351|GO:0009742
Mtr1g0590 249 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 118 183 IPR033264 GO:0003700|GO:0006351|GO:0009742
Mtr1g0590 249 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 183 248 IPR033264 GO:0003700|GO:0006351|GO:0009742
Mtr1g0590 249 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0590 Mtr-Chr1 6791446 6793708 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Mtr1g0590 BES1_N 2.6e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0590 1 6791446 6793708 Mtr1g0590 1 6791446 6793708 ECH
Mtr1g0590 1 6791446 6793708 Mtr3g4171 3 55637688 55639850 PCT